Category:Software
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If you don't see the application you're looking for in the lists provided below or when running $ module spider "app_name"
on your terminal, please submit a request at suppor.rc.ufl.edu.
Click here to find the full list of installed applications that can be ran on HiPerGator.
Or you can browse through the sub-categories or software package names in the table below.
To see what modules were recently added or removed and why see Environment Module Add / Remove log for the last 30 days.
In addition, full historical log of module additions and removals is available.
Add New App
To add a documentation page for a new piece of software installed into /apps please go to Add New App Page.
Subcategories
This category has the following 62 subcategories, out of 62 total.
A
B
C
D
F
G
H
I
M
N
P
R
S
U
V
W
Pages in category "Software"
The following 200 pages are in this category, out of 2,126 total.
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- NetCDF-F
- NetLogo
- NEURON
- Newbler
- Newick utils
- NewTargets
- Nextclade
- NextDenovo
- Nextflow
- NextGenMap
- NextPolish
- Nextstrain
- Nf-core
- NGC CLI
- NGmerge
- Ngmlr
- Ngs-bits
- NGS-SDK
- Ngscheckmate
- Ngsremix
- Ngstools
- Nilearn
- Nimare
- Nipype
- NLP
- Nlr-annotator
- NLR-Parser
- Nlrtracker
- NMRPipe
- NONMEM
- Nonpareil
- Novoalign
- NOVOPlasty
- NPhase
- NpScarf
- NQuire
- Nsight
- Nsightsys
- Nt
- NtEdit
- Nubeamdedup
- NucDiff
- NucleoATAC
- Nuke
- Nullarbor
- Numba
- NUPACK
- Nvhpc
- Nvidia CUDA Toolkit
- NWChem
- NxTrim
O
- Oases
- Obitools
- OCaml
- OCOCO
- Octave
- Odgi
- Olego
- OMindel
- OMNI-C
- OmniCLIP
- OMNIVERSE
- Omniverse
- OMSV
- OneFormer
- Ont fast5 api
- Ont tutorial cas9
- ONT-Bonito
- Open OnDemand
- Open-cravat
- Open3d
- OPENACC
- OpenBabel
- OpenBLAS
- OpenCL
- OpenCV
- OpenFOAM
- Openmc
- OpenMM
- OpenMPI
- OpenNeuro
- Opennmt-py
- OpenPIV-python
- OpenPose
- Openrdp
- OpenSim
- OpenSlide
- Openstructure
- OptiType
- Orange3
- ORCA
- OrganellePBA
- OrthoFiller
- OrthoFinder
- Orthofisher
- Orthograph
- Orthologer
- OrthoMCL
- Osprey
- OTB
- Ovito
P
- P4est
- P4vasp
- P53MH
- P7zip
- PacBio
- Package-GFE
- PacMAP
- PALADIN
- PALES
- PAML
- Panaroo
- Pandaseq
- Pandoc
- Pangolin
- Panseq
- PanX
- PAPI
- Parabricks
- Parallel
- Paralyzer
- ParaView
- ParGenes
- ParlAI
- Parsnp
- PartitionFinder
- PASA
- Pascal
- PASTA
- PATHd8
- Pathoscope
- PATRIC
- PAUDA
- PAUP
- PB-Assembly
- Pbalign
- PBCCS
- Pbcore
- PBGCpp
- Pbipa
- PBJelly
- Pbmm2
- Pbpigeon
- Pbrt
- Pbsmrtpipe
- Pbtk
- Pbtranscript-tofu
- Pcangsd
- PCIT
- PCRE
- PDA
- Pdb2pqr
- PeakSplitter
- PEAR
- Peneasy
- PennCNV
- Perl
- PerM
- PETSc
- PfamScan
- PGAP
- PGDSpider
- Pggb
- PhaME
- Phanotate
- Pharmcat
- PHASE
- PHAST
- Phenix
- PHI
- PhiSpy
- PHITS
- PHLAWD
- PhotoScan
- Photutils
- PHYling
- PHYLIP
- PhyloAcc
- PhyloBayes
- PhyloFlash
- Phylonet
- PhyloParser
- PhyloPhlAn2
- Phylopypruner
- PhyloSift
- PhyloTF2
- Phyluce
- PhyML
- Phynd
- Physher
- PHYUTILITY
- Phyx
- PIA2
- Picard-tools
- PICRUSt
- PICSL
- Piggy
- Pigz
- PILON
- Pindel