OrthoFinder

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Description

orthofinder website  

OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.

Required Modules

Serial

  • orthofinder

System Variables

  • HPC_ORTHOFINDER_DIR - installation directory





Validation

  • Validated 4/5/2018