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orthofinder website  

OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.

Environment Modules

Run module spider orthofinder to find out what environment modules are available for this application.

System Variables

  • HPC_ORTHOFINDER_DIR - installation directory