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nlr-parser website  

NLR-Parser is a tool to rapidly annotate the NLR complement from sequenced plant genomes.

The NLR-Parser refines the output of MAST and reliably annotates disease resistance genes encoding for nucleotide-binding leucine-rich repeat (NLR) proteins.

Environment Modules

Run module spider nlr-parser to find out what environment modules are available for this application.

System Variables

  • HPC_NLR-PARSER_DIR - installation directory
  • HPC_NLR-PARSER_BIN - executable directory
  • HPC_NLR-PARSER_LIB - library directory
  • HPC_NLR-PARSER_XML - xml directory

Additional Information

NLR motif definitions file is located in the $HPC_NLRPARSER_XML directory.


If you publish research that uses nlr-parser you have to cite it as follows:

For using the NLR motifs, please cite Jupe et al. (2012) For NLR-Parser, please cite Steuernagel et al. (2015).