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- Or you can browse through the sub-categories or software package names in the table below. To add a documentation page for a new piece of software installed into /apps please go to [[Add New App Page]].2,123 members (62 subcategories, 0 files) - 19:53, 20 February 2024
- 26 bytes (2 words) - 17:41, 28 September 2017
- #REDIRECT [[Software Development Policies]]43 bytes (4 words) - 20:46, 6 June 2022
- ==External Software Components== ...d to get a security review or risk assessment for such software. Only when software is exposed to the outside world, e.g. as part of PubApps, will a security r533 bytes (84 words) - 15:43, 19 August 2022
- ==Availabile Linux Software installed in ResVault==2 KB (262 words) - 18:47, 20 February 2023
Page text matches
- [[Category:Software]][[Category:Phylogenetics]]4 KB (480 words) - 15:00, 14 December 2022
- [[Category:Software]]16 members (0 subcategories, 0 files) - 15:38, 19 August 2022
- [[Category:Software]][[Category:Phylogenetics]] DoGFinder software is a package that identifies DoGs and quantifies their expression levels, f2 KB (252 words) - 21:58, 3 November 2020
- [[Category:Software]][[Category:Genomics]]2 KB (267 words) - 13:03, 15 August 2022
- [[Category:Software]][[Category:Library]][[Category:Compiler]]2 KB (291 words) - 13:26, 15 August 2022
- [[Category:Software]][[Category:Programming]]2 KB (285 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]3 KB (322 words) - 16:07, 21 February 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (248 words) - 18:03, 13 November 2020
- [[Category:Software]][[Category:Biology]] You must have configuration files to be able to run this software. The example configuration file can be copied using the following command:3 KB (351 words) - 18:33, 12 August 2022
- [[Category:Software]][[Category:Utility]]2 KB (254 words) - 17:34, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (350 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Physics]] Ece software container3 KB (360 words) - 21:39, 3 March 2023
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impa3 KB (350 words) - 20:27, 12 August 2022
- [[Category:Software]]2 KB (256 words) - 21:20, 17 May 2023
- [[Category:Software]][[Category:Biology]][[Category:Assembly]]3 KB (301 words) - 18:39, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...lkit containing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. See http://dlib.net for the main proje2 KB (269 words) - 13:11, 4 May 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (244 words) - 19:12, 2 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]3 KB (303 words) - 16:44, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (409 words) - 21:11, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (247 words) - 18:30, 1 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Modeling]][[Category:Structure]] Rosetta is the premier software suite for modeling macromolecular3 KB (302 words) - 20:37, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (240 words) - 21:56, 21 August 2022
- [[Category:Software]][[Category:Sequencing]][[Category:Phylogenetics]] |{{#vardefine:url|https://www.universalsequencing.com/software}}2 KB (263 words) - 20:52, 18 May 2022
- [[Category:Software]][[Category:Library]][[Category:Math]]5 KB (607 words) - 15:40, 6 June 2022
- [[Category:Software]][[Category:Genomics]][[Category:Biology]]4 KB (588 words) - 19:25, 18 August 2022
- [[Category:Software]][[Category:Simulation]]2 KB (266 words) - 13:34, 31 July 2020
- [[Category:Software]][[Category:Graphics]] Open3D is an open-source library that supports rapid development of software that deals with 3D data. The Open3D frontend exposes a set of carefully sel3 KB (414 words) - 17:16, 7 July 2023
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:url|http://genfaculty.rutgers.edu/hey/software}}2 KB (299 words) - 18:44, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (272 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Biology]]4 KB (460 words) - 15:10, 15 August 2022
- [[Category:Software]][[Category:Programming]]2 KB (292 words) - 17:53, 22 August 2022
- [[Category:Software]][[Category:phylogenetics]]3 KB (306 words) - 21:29, 6 December 2019
- [[Category:Software]][[Category:Biology]]2 KB (255 words) - 16:51, 30 January 2023
- [[Category:Software]][[Category:Geospatial]] ...ort System), is a free and open source Geographic Information System (GIS) software suite used for geospatial data management and analysis, image processing, g5 KB (593 words) - 21:27, 14 December 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:url|http://udall-lab.byu.edu/Research/Software/BamBam.aspx}}3 KB (456 words) - 18:00, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (274 words) - 22:15, 26 August 2020
- [[Category:Software]][[Category:Phylogenetics]] ...t has evolved over time to accomodate larger genomes. The impetus for this software package was to be able to accurately and easily annotate a genome for submi3 KB (375 words) - 16:51, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Modeling]][[Category:Structure]]3 KB (364 words) - 19:53, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (319 words) - 21:18, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (279 words) - 16:51, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (249 words) - 17:27, 22 August 2022
- export2graphlan is a conversion software tool for producing both3 KB (314 words) - 15:12, 15 August 2022
- [[Category:Software]][[Category:Biology]]3 KB (350 words) - 15:55, 23 August 2022
- [[Category:Software]]3 KB (307 words) - 20:09, 3 August 2023
- ...les for computer vision and natural language processing tasks using the AI software stacks on HiPerGator. Users may copy these examples to their own space, add ...MultiNode MONAI] || distributed compute, computer vision || Use the MONAI software to train an image classifier on multiple nodes.3 KB (367 words) - 18:50, 30 August 2022
- [[Category:Software]][[Category:Biology]]2 KB (268 words) - 15:47, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (245 words) - 21:21, 6 December 2019
- [[Category:Software]] The scripts for this software should be execytes using the path from the HPC_HGRAPH2GRAPH_BIN environment2 KB (279 words) - 17:06, 14 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (237 words) - 18:05, 1 June 2022
- [[Category:Software]][[Category:Math]] ...for complex FEA and CFD simulation. It is based on the time-proven CUBIT™ software from Sandia National Laboratories. For more than two decades, csimsoft and2 KB (291 words) - 17:05, 22 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Alignment]][[Category:Sequencing]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (342 words) - 19:29, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->3 KB (465 words) - 14:48, 14 December 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (254 words) - 14:46, 4 September 2020
- [[Category:Software]][[Category:Phylogenetics]] TDNAscan: A Software to Identify Complete and Truncated T-DNA insertions2 KB (278 words) - 18:28, 7 December 2021
- [[Category:Software]][[Category:Neuroscience]][[Category:Biology]][[Category:Imaging]] Starting with freesurfer/6.0.0 the software is available as a Singularity container. To run any executable use the 'lau3 KB (323 words) - 20:09, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:url|http://rna.igmors.u-psud.fr/Software/erpin.php}}3 KB (377 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]]3 KB (380 words) - 16:32, 1 February 2023
- [[Category:Software]][[Category:Phylogenetics]] GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements.3 KB (388 words) - 21:20, 6 December 2019
- [[Category:Software]][[Category:Programming]] ...on scripts. This gives SCons many powerful capabilities not found in other software build tools.2 KB (293 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Biology]]2 KB (237 words) - 14:20, 12 August 2022
- [[Category:Software]][[Category:Neuroscience]][[Category:Biology]][[Category:Imaging]] SNAP is a software application used to segment structures in 3D medical images. It provides se3 KB (397 words) - 19:23, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...ardefine:url|https://www.nvidia.com/en-us/docs/parabricks/quickstart-guide/software-overview/}}4 KB (574 words) - 21:25, 14 December 2022
- [[Category:Software]] |{{#vardefine:url|https://jmarchini.org/software/#impute-5}}3 KB (351 words) - 18:49, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (304 words) - 13:41, 11 October 2021
- [[Category:Software]][[Category:Phylogenetics]] |{{#vardefine:url|https://cistem.org/software}}3 KB (349 words) - 13:35, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (392 words) - 15:50, 12 December 2019
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://derisilab.ucsf.edu/software/price/}}2 KB (286 words) - 16:26, 10 June 2022
- [[Category:Software]][[Category:Programming]][[Category:Library]] ...the best MPI library available. Open MPI offers advantages for system and software vendors, application developers and computer science researchers.3 KB (337 words) - 19:02, 21 July 2023
- [[Category:Software]][[Category:Simulation]]2 KB (241 words) - 15:04, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Physics]] Cantera is a suite of object-oriented software tools for problems involving3 KB (308 words) - 13:19, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:Graphics]]3 KB (417 words) - 17:40, 22 August 2022
- [[Category:Python]][[Category:Software]] ...use this guide to install a small personal python module or a python-based software package that is packaged with distutils i.e. you install it with '<code>pyt2 KB (243 words) - 14:51, 10 February 2023
- [[Category:Software]][[Category:genomics]][[Category:Biology]] ClipKIT: a multiple sequence alignment trimming software for accurate phylogenomic inference. Steenwyk et al. 2020, PLoS Biology. do2 KB (276 words) - 13:29, 15 August 2022
- ...:''' There is a known issue with the CIFS client in Mac Finder. The Finder software in current version of MacOS does not have a refresh button to update conten5 KB (816 words) - 17:31, 31 August 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (311 words) - 15:22, 16 March 2020
- [[Category:Software]][[Category:Phylogenetics]] |{{#vardefine:url|http://abacus.gene.ucl.ac.uk/software/indelible/}}3 KB (384 words) - 13:34, 28 June 2021
- [[Category:Software]][[Category:biology]]2 KB (296 words) - 20:22, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (254 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Genomics]][[Category:Biology]]3 KB (306 words) - 20:05, 23 March 2023
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]][[Category:RNA-3 KB (361 words) - 21:01, 21 August 2022
- [[Category:Software]][[Category:Physics]] CASM is an open source software package designed to perform first-principles statistical mechanical studies4 KB (453 words) - 13:20, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (255 words) - 15:47, 28 April 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:NGS]]3 KB (299 words) - 17:00, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Neuroscience]]3 KB (311 words) - 18:51, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (253 words) - 17:44, 20 May 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (381 words) - 15:33, 27 May 2022
- [[Category:Software]][[Category:modeling]]2 KB (276 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (271 words) - 20:23, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (233 words) - 19:18, 2 June 2022
- [[Category:Software]][[Category:Programming]][[Category:Language]]3 KB (320 words) - 18:56, 21 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (432 words) - 19:27, 10 June 2022
- [[Category:Software]][[Category:Image Processing]]3 KB (327 words) - 19:15, 23 May 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (272 words) - 20:18, 26 May 2022
- [[Category:Software]][[Category:Library]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->2 KB (257 words) - 20:57, 21 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (275 words) - 22:26, 26 August 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (265 words) - 13:31, 28 April 2021
- [[Category:Software]][[Category:Phylogenetics]] LACHESIS: A software tool to measure the thread of life.2 KB (263 words) - 21:21, 6 December 2019
- [[Category:Software]]2 KB (281 words) - 17:03, 24 July 2023
- [[Category:Software]][[Category:Data]]19 members (0 subcategories, 0 files) - 14:53, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://ab.inf.uni-tuebingen.de/software/megan/}}4 KB (484 words) - 19:50, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] ...MCScan algorithm for detection of synteny and collinearity and extends the software by incorporating 15 utility programs for display and further analyses.3 KB (350 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Molecular_Dynamics]]3 KB (416 words) - 16:47, 27 November 2023
- [[Category:Software]][[Category:Biology]]3 KB (356 words) - 17:44, 22 August 2022
- [[Category:Software]][[Category:Programming]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->2 KB (335 words) - 12:02, 26 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...ed in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good sca3 KB (413 words) - 20:22, 2 October 2023
- [[Category:Software]]3 KB (401 words) - 20:57, 3 June 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (251 words) - 13:50, 19 August 2022
- [[Category:Software]]2 KB (245 words) - 14:54, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Variant Calling]] |{{#vardefine:url|http://cnsgenomics.com/software/gcta/index.html}}3 KB (331 words) - 12:56, 15 August 2022
- [[Category:Software]]12 members (1 subcategory, 0 files) - 19:55, 22 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->2 KB (276 words) - 18:16, 12 August 2022
- [[Category:Software]][[Category:Imaging]] ImageMagick® is a software suite to create, edit, compose, or convert bitmap images. It can read and w3 KB (380 words) - 18:46, 15 August 2022
- [[Category:Software]]2 KB (244 words) - 14:40, 28 July 2023
- [[Category:Software]][[Category:Graphics]]3 KB (302 words) - 20:45, 18 August 2022
- [[Category:Software]]17 members (0 subcategories, 0 files) - 17:19, 6 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (292 words) - 21:21, 6 December 2019
- [[Category:Software]]2 KB (288 words) - 18:11, 22 September 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (354 words) - 18:36, 10 June 2022
- [[Category:Software]][[Category:biology]][[Category:phylogenetics]][[Category:Genomics]]3 KB (321 words) - 15:45, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->2 KB (249 words) - 18:30, 12 August 2022
- [[Category:Software]][[Category:Physics]]3 KB (416 words) - 19:34, 30 November 2022
- [[Category:Software]][[Category:Phylogenetics]] Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework.2 KB (252 words) - 22:27, 8 September 2020
- [[Category:Software]][[Category:Programming]][[Category:Library]]2 KB (294 words) - 12:09, 26 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (368 words) - 18:51, 10 June 2022
- [[Category:Software]]4 KB (606 words) - 15:57, 23 August 2023
- [[Category:Software]][[Category:Biology]][[Category:Chemistry]]3 KB (385 words) - 13:32, 19 August 2022
- [[Category:Software]]2 KB (259 words) - 21:49, 28 February 2023
- [[Category:Software]][[Category:Programming]]2 KB (249 words) - 21:49, 21 August 2022
- [[Category:Software]][[Category:Programming]] ...designed to build, test and package software. CMake is used to control the software compilation process using simple platform and compiler independent configur3 KB (326 words) - 13:49, 15 August 2022
- [[Category:Software]][[Category:Genomics]][[Category:Sequencing]][[Category:Biology]] CRISPResso2 is a software pipeline designed to enable rapid and intuitive interpretation of genome ed2 KB (282 words) - 13:25, 11 October 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (242 words) - 13:29, 23 September 2020
- [[Category:Software]][[Category:Library]]2 KB (274 words) - 17:36, 31 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:url|http://smithlabresearch.org/software/piranha/}}2 KB (266 words) - 16:02, 10 June 2022
- [[Category:Software]][[Category:Imaging]]2 KB (248 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Workflow Automation]]2 KB (227 words) - 13:56, 7 April 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (331 words) - 20:13, 1 June 2022
- [[Category:Software]][[Category:Modeling]]2 KB (287 words) - 19:23, 1 June 2022
- [[Category:Software]][[Category:Biology]]2 KB (261 words) - 18:00, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Variant Calling]] |{{#vardefine:url|http://cmpg.unibe.ch/software/BayeScan/index.html}}3 KB (402 words) - 18:10, 12 August 2022
- [[Category:Software]][[Category:Programming]][[Category:Language]] |{{#vardefine:url|https://www.gnu.org/software/emacs/download.html}}3 KB (407 words) - 14:59, 15 August 2022
- CPU cores, Memory (RAM), GPU accelerators, software licenses, etc. are referred to as '''Trackable Resources''' (TRES) by the s4 KB (598 words) - 03:35, 26 February 2023
- [[Category:Software]][[Category:Workflow Automation]]3 KB (348 words) - 14:17, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]][[Category:Biology]]2 KB (257 words) - 18:15, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (271 words) - 16:28, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (304 words) - 19:53, 20 April 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (271 words) - 15:28, 12 August 2022
- [[Category:Software]][[Category:biology]][[Category:phylogenetics]]3 KB (305 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]]2 KB (303 words) - 14:55, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (465 words) - 20:22, 12 August 2022
- [[Category:Software]]2 KB (259 words) - 18:08, 15 August 2022
- [[Category:Software]][[Category:Physics]][[Category:Structure]]3 KB (320 words) - 23:01, 21 August 2022
- [[Category:Software]][[Category:Machine Learning]][[Category:Image Processing]] ...generative image modeling. This module provides access to the StyleGAN 3 software.3 KB (298 words) - 16:09, 22 August 2022
- [[Category:Software]]3 KB (324 words) - 18:57, 17 September 2021
- [[Category:Software]][[Category:Biology]]2 KB (283 words) - 17:51, 19 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (322 words) - 18:53, 10 July 2020
- [[Category:Software]]2 KB (287 words) - 14:06, 29 March 2021
- [[Category:Software]][[Category:Programming]] |{{#vardefine:url|https://www.gnu.org/software/guile/}}2 KB (293 words) - 18:08, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]] ...membership queries for de Bruijn graphs was recently proposed in [1]. This software is an implementation of the data structure in [1] with dynamic edges (and n3 KB (312 words) - 21:20, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->3 KB (321 words) - 19:26, 18 August 2022
- [[Category:Software]][[Category:Biology]][[Category:RNA-Seq]]3 KB (388 words) - 18:54, 10 June 2022
- [[Category:Software]][[Category:Performance Analysis]][[Category:Performance Analysis]]3 KB (330 words) - 20:39, 24 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (277 words) - 16:33, 27 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]] |{{#vardefine:url|http://mafft.cbrc.jp/alignment/software/}}2 KB (295 words) - 20:23, 15 August 2022
- [[Category:Software]][[Category:Utility]]3 KB (300 words) - 16:31, 21 August 2022
- [[Category:Software]]2 KB (245 words) - 18:41, 2 October 2023
- [[Category:Software]][[Category:Phylogenetics]]3 KB (312 words) - 18:03, 10 May 2021
- [[Category:Software]][[Category:Language]]2 KB (252 words) - 19:05, 6 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (256 words) - 15:23, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (271 words) - 14:23, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (278 words) - 21:44, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://cab.spbu.ru/software/spades/}}2 KB (280 words) - 15:47, 22 August 2022
- [[Category:Software]][[Category:Biology]]2 KB (239 words) - 22:53, 21 January 2024
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (375 words) - 20:55, 12 August 2022
- [[Category:Software]][[Category:Revision Control]]2 KB (277 words) - 20:07, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]][[Category:Biology]] |{{#vardefine:url|http://cmpg.unibe.ch/software/fastsimcoal2/}}4 KB (481 words) - 15:25, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (243 words) - 18:32, 1 June 2022
- [[Category:Software]][[Category:Image Processing]] Agisoft PhotoScan is a stand-alone software product that performs photogrammetric processing of digital images and gene3 KB (316 words) - 19:57, 10 January 2023
- [[Category:Software]]3 KB (297 words) - 14:21, 11 October 2022
- [[Category:Software]][[Category:Language]][[Category:Programming]][[Category:Statistics]]3 KB (412 words) - 20:49, 21 October 2022
- [[Category:Software]][[Category:Chemistry]] {{note|VASP is licensed software and its use is limited to those users who have been approved by the license4 KB (534 words) - 22:01, 29 November 2023
- [[Category:Software]][[Category:Statistics]][[Category:Programming]] |{{#vardefine:exe|1}} <!--Present manual instructions for running the software -->6 KB (981 words) - 20:45, 16 October 2023
- [[Category:Software]][[Category:Library]]2 KB (283 words) - 21:31, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (250 words) - 14:35, 4 September 2020
- [[Category:Software]]2 KB (274 words) - 17:55, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (253 words) - 15:01, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (315 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (234 words) - 18:53, 1 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]] This software package is for estimating allele and genotype frequencies from nucleotide r2 KB (280 words) - 16:45, 10 June 2022
- [[Category:Software]]2 KB (280 words) - 14:12, 21 October 2022
- [[Category:Software]][[Category:Biology]][[Category:Alignment]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->2 KB (313 words) - 19:55, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Math]]3 KB (296 words) - 16:26, 22 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (267 words) - 22:42, 8 September 2020
- [[Category:Software]][[Category:Phylogenetics]]2 KB (274 words) - 18:30, 16 May 2023
- [[Category:Software]][[Category:Simulation]]3 KB (324 words) - 21:24, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]2 KB (285 words) - 21:24, 6 December 2019
- This page describes the collection of Computer Vision software on HiperGator. Computer vision is a crucial field of artificial intelligenc ...ow|tensorflow]] or ngc-tensorflow''': TensorFlow is a free and open-source software library for machine learning and artificial intelligence. '''ngc-tensorFlow4 KB (563 words) - 20:59, 21 December 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (435 words) - 19:21, 10 June 2022
- [[Category:Software]][[Category:library]] |{{#vardefine:url|http://hdfeos.org/software/pyhdf.php}}2 KB (267 words) - 15:25, 3 June 2022
- [[Category:Software]][[Category:Biology]][[Category:genomics]] ...for Quantitative Insights Into Microbial Ecology. QIIME is an open source software package for comparison and analysis of microbial communities, primarily bas4 KB (555 words) - 15:15, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Modeling]]3 KB (296 words) - 18:27, 12 August 2022
- [[Category:Software]]3 KB (294 words) - 19:29, 14 November 2022
- [[Category:Software]][[Category:genomics]][[Category:Biology]]2 KB (283 words) - 13:30, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (323 words) - 14:25, 12 October 2020
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Genomics]] SHRiMP is a software package for aligning genomic reads against a target genome. It was primaril2 KB (269 words) - 22:55, 21 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (289 words) - 19:43, 4 November 2020
- [[Category:Software]][[Category:genomics]][[Category:Biology]]3 KB (345 words) - 13:30, 15 August 2022
- [[Category:Software]][[Category:Library]][[Category:Compiler]][[Category:Math]]2 KB (269 words) - 14:33, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (263 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]3 KB (309 words) - 17:01, 24 February 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (392 words) - 17:58, 27 May 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (274 words) - 16:16, 10 June 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]]2 KB (264 words) - 16:52, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (246 words) - 21:24, 6 December 2019
- [[Category:Software]] * I am not a member of a research group developing software competitive to Gaussian.1 KB (185 words) - 14:26, 30 June 2017
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]][[Category:Genomics]]2 KB (281 words) - 19:18, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]3 KB (360 words) - 14:35, 15 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (295 words) - 19:11, 5 April 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]]2 KB (235 words) - 19:45, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (317 words) - 13:42, 4 May 2020
- [[Category:Software]][[Category:Phylogenetics]]3 KB (314 words) - 20:12, 8 February 2021
- [[Category:Software]][[Category:Biology]][[Category:Genomics]]2 KB (277 words) - 21:21, 6 December 2019
- [[Category:Software]][[Category:Phylogenetics]]3 KB (329 words) - 21:03, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]]2 KB (271 words) - 15:52, 10 June 2022
- [[Category:Software]][[Category:Performance Analysis]][[Category:Programming]] |{{#vardefine:exe|}} <!--Present manual instructions for running the software -->3 KB (360 words) - 16:36, 21 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (307 words) - 20:35, 11 August 2022
- [[Category:Software]][[Category:Genomics]]2 KB (292 words) - 21:38, 10 January 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (250 words) - 12:38, 12 August 2022
- [[Category:Software]][[Category: Library]][[Category: Math]][[Category:Compiler]]2 KB (271 words) - 17:47, 15 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:Genomics]]3 KB (297 words) - 21:55, 6 July 2022
- [[Category:Software]]4 KB (472 words) - 20:55, 12 August 2022
- [[Category:Software]][[Category:Biology]]3 KB (338 words) - 19:06, 12 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (385 words) - 21:20, 6 December 2019
- [[Category:Software]]4 KB (561 words) - 14:25, 12 August 2022
- [[Category:Software]]3 KB (325 words) - 21:51, 24 February 2023
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]2 KB (269 words) - 21:22, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Documentation]] This module enables the use of the cuOpt software2 KB (281 words) - 19:20, 27 January 2023
- [[Category:Software]][[Category:Phylogenetics]]2 KB (252 words) - 18:00, 1 June 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:url|http://smithlab.usc.edu/plone/software/librarycomplexity}}3 KB (303 words) - 20:26, 12 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]]3 KB (294 words) - 14:12, 15 August 2022
- [[Category:Software]][[Category:Machine Learning]]2 KB (283 words) - 14:00, 27 May 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]] ...genome size in the binning summary page. Users could use MEGAN or similar software on MaxBin bins to find out the taxonomy of each bin after the binning proce3 KB (364 words) - 17:56, 27 May 2022
- [[Category:Software]][[Category:Phylogenetics]]2 KB (251 words) - 21:29, 6 December 2019
- [[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]] ADMIXTOOLS (Patterson et al. 2012) is a software package that supports formal tests of whether admixture occurred, and makes3 KB (400 words) - 20:50, 11 August 2022
- [[Category:Software]]3 members (0 subcategories, 0 files) - 19:50, 22 August 2022
- [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Genomics]]3 KB (354 words) - 20:09, 24 August 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (342 words) - 21:18, 6 December 2019
- [[Category:Software]][[Category:Biology]]2 KB (263 words) - 17:17, 15 August 2022
- [[Category:Software]]2 KB (264 words) - 15:04, 19 August 2022
- [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]3 KB (325 words) - 17:29, 10 June 2022
- [[Category:Software]][[Category:Phylogenetics]]3 KB (331 words) - 21:34, 21 August 2022