eggNOG-mapper is a tool for fast functional annotation of novel sequences. It uses precomputed orthologous groups and phylogenies from the eggNOG database to transfer functional information from fine-grained orthologs only.
module spider eggnog-mapper to find out what environment modules are available for this application.
- HPC_EGGNOG-MAPPER_DIR - installation directory
- HPC_EGGNOG-MAPPER_BIN - executable directory
- EGGNOG_DATA_DIR - application databases directory
If you publish research that uses eggnog-mapper you have to cite it as follows:
Please cite the following two papers if you use eggNOG-mapper v2:  eggNOG-mapper v2: functional annotation, orthology assignments, and domain prediction at the metagenomic scale. Carlos P. Cantalapiedra, Ana Hernandez-Plaza, Ivica Letunic, Peer Bork, Jaime Huerta-Cepas. biorxiv (2021). doi: https://doi.org/10.1101/2021.06.03.446934  eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses. Jaime Huerta-Cepas, Damian Szklarczyk, Davide Heller, Ana Hernández-Plaza, Sofia K Forslund, Helen Cook, Daniel R Mende, Ivica Letunic, Thomas Rattei, Lars J Jensen, Christian von Mering, Peer Bork Nucleic Acids Res. 2019 Jan 8; 47(Database issue): D309–D314. doi: 10.1093/nar/gky1085