Haploflow is a strain-aware viral genome assembler for short read sequence data. It uses a flow algorithm on a deBruijn graph data structure to resolve viral strains.
module spider Haploflow to find out what environment modules are available for this application.
- HPC_HAPLOFLOW_DIR - installation directory
- HPC_HAPLOFLOW_BIN - executable directory
If you publish research that uses Haploflow you have to cite it as follows: