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minigraph website  

Minigraph is a sequence-to-graph mapper and graph constructor. It finds approximate locations of a query sequence in a sequence graph and incrementally augments an existing graph with long query subsequences diverged from the graph. The figure on the right briefly explains the procedure.

Environment Modules

Run module spider minigraph to find out what environment modules are available for this application.

System Variables

  • HPC_MINIGRAPH_DIR - installation directory
  • HPC_MINIGRAPH_BIN - executable directory