Kallisto

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Description

kallisto website  

Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment.

Required Modules

Serial

  • kallisto

System Variables

  • HPC_KALLISTO_DIR - installation directory