t-Stochastic Neighborhood Embedding (t-SNE) is a highly successful method for dimensionality reduction and visualization of high dimensional datasets. A popular implementation of t-SNE uses the Barnes-Hut algorithm to approximate the gradient at each iteration of gradient descent. We accelerated this implementation as follows
module spider Fit-sne to find out what environment modules are available for this application.
- HPC_FIT-SNE_DIR - installation directory
- HPC_FIT-SNE_BIN - executable directory
- HPC_FIT-SNE_EXE - example directory