Category:Software
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If you don't see the application you're looking for in the lists provided below or when running $ module spider "app_name"
on your terminal, please submit a request at suppor.rc.ufl.edu.
Click here to find the full list of installed applications that can be ran on HiPerGator.
Or you can browse through the sub-categories or software package names in the table below.
To see what modules were recently added or removed and why see Environment Module Add / Remove log for the last 30 days.
In addition, full historical log of module additions and removals is available.
Add New App
To add a documentation page for a new piece of software installed into /apps please go to Add New App Page.
Subcategories
This category has the following 62 subcategories, out of 62 total.
A
B
C
D
F
G
H
I
M
N
P
R
S
U
V
W
Pages in category "Software"
The following 200 pages are in this category, out of 2,126 total.
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- Apptainer
- Apptests
- APT
- Aquamis
- ARC
- Arcashla
- Arcticporechop
- Aria2
- ARKS
- Armadillo
- ARPACK
- ArrayFire
- Arriba
- ART
- Artemis
- Asap
- Asaq
- ASE-ANI
- ASHS
- ASPECT
- Assembly-stats
- Assemblytics
- Asset
- Assexon
- AStalavista
- Aster
- Asteroid
- ASTRAL
- ASTRID
- Astropy
- ATAT
- ATLAS
- Atom
- AtomEye
- AtomMan
- ATRAM
- Augustus
- Auto3DEM
- AutoDock
- AutoDock-GPU
- Autodock-vina
- Autometa
- Automlsa2
- AWSCLI
- Azoo
B
- Bactopia
- Badread
- Bakta
- BALi-Phy
- BAM-matcher
- Bam-Readcount
- Bamaddrg
- BamBam
- Bamm
- Bamsnap
- Bamstats
- Bamsurgeon
- Bamtofastq
- Bamtools
- BamUtil
- BAPS
- Barrnap
- Basemount
- BatMeth2
- Bax2bam
- BayArea
- Bayenv
- BayesAss
- BayeScan
- BayesR
- BayesTraits
- Baypass
- BBMap
- Bcftools
- Bcl2fastq
- BDG-SeQuila
- BEAGLE
- BEAR
- BEAST
- BEAST2-XML
- Beastx
- BEDOPS
- BEDTools
- Bertini
- BERTopic
- BESST
- BFAST
- BIDSCOIN
- Bifrost
- BiG-SCAPE
- Bigslice
- BinPacker
- BinSanity
- Bioawk
- BioBakery
- Biodiverse
- Biolite
- BIOM
- BIOMART
- Bionemo
- Biopieces
- BirdNET
- BIRDS
- Bismark
- Blackfynn
- BLASR
- Blast
- Blast2GO
- Blast2GO CLI
- BLAT
- Blender
- Blink
- Blitz
- BlobTools
- Bloomfiltertrie
- BloomTree
- BLUPF90
- BMGE
- Bmtagger
- BOLT-LMM
- BoltzTraP
- Boost
- Booster
- Botorch
- Bowtie
- Bowtie2
- BoxCLI
- BPGA
- BPP
- BppSuite
- Bracken
- BrainIAK
- Braker
- BRANCH
- BRATNextGen
- BreakDancer
- Breakseq
- Brewery
- Bridger
- BRIG
- Brkraw
- BRM
- Bruker2nifti
- Bsmap
- Bsoft
- BSseeker2
- Bubbleparse
- BUCKy
- BUSCO
- BWA
- Bwa-mem2
- Bwa-meth
- BWA-PSSM
- Bxh xcede tools
- BYOBU
- Bzip2
C
- C-wap
- Cactus
- CAFE
- Came
- Camino
- Cammiq
- CAMP
- Cantera
- Canu
- CANVAS
- CAP3
- Caper
- Capnp
- Captus
- CARTA
- CASAVA
- CASM
- CasOFFinder
- Catch
- CAVIAR
- CBGpipe
- CCMetagen
- CD-HIT
- CDBFasta
- CDNA Cupcake
- CDO
- CDRT
- CellProfiler
- CellRanger
- CellRanger-ARC
- CellRanger-ATAC
- CellRanger-DNA
- Centrifuge
- CESM
- CFITSIO
- CGAL
- CGATools
- Cgmaptools
- CGView
- CHARMM
- ChartDirector
- CheckM
- Checkv
- Chewbbaca