The Sequence Bloom Tree (SBT) is a method that will allow you to index a set of short-read sequencing experiments and then query them quickly for a given sequence. The code base provided here is an implementation of SBT written in C++ and is open source.
module spider Bloomtree to find out what environment modules are available for this application.
- HPC_BLOOMTREE_DIR - installation directory
If you publish research that uses Bloomtree you have to cite it as follows: