Category:Software
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If you don't see the application you're looking for in the lists provided below or when running $ module spider "app_name"
on your terminal, please submit a request at suppor.rc.ufl.edu.
Click here to find the full list of installed applications that can be ran on HiPerGator.
Or you can browse through the sub-categories or software package names in the table below.
To see what modules were recently added or removed and why see Environment Module Add / Remove log for the last 30 days.
In addition, full historical log of module additions and removals is available.
Add New App
To add a documentation page for a new piece of software installed into /apps please go to Add New App Page.
Subcategories
This category has the following 62 subcategories, out of 62 total.
A
B
C
D
F
G
H
I
M
N
P
R
S
U
V
W
Pages in category "Software"
The following 200 pages are in this category, out of 2,126 total.
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- Popoolation
- Porechop
- Poretools
- Portcullis
- PosiGene
- POV-Ray
- Powerfit
- Pplacer
- PRANK
- Predector
- Predectorutils
- Preseq
- PRICE
- Primer3
- Primus
- PRINSEQ
- PRINSEQ++
- ProbABEL
- Probalign
- Processing
- Prodigal
- ProDy
- Program Database Toolkit
- PROJ
- Prokka
- Proovread
- ProSplign
- Protege
- Proteinortho
- ProtExcluder
- ProtHint
- Protobuf
- Prottest3
- PROVEAN
- PRSice
- Pseudofinder
- PsiCLASS
- PSMC
- PsRobot
- Pufferfish
- PureCLIP
- Purge haplotigs
- PurgeDups
- Pvconv
- Pyani
- Pybedtools
- PyBSASeq
- PyCharm
- Pycharm-pro
- Pychopper
- PyCogent
- Pycoqc
- PyDeface
- Pydock3
- PyEGA3
- PyEXR
- Pyfaidx
- Pyfasta
- Pygenometracks
- Pygot
- Pyhdf
- PyHIST
- Pymesh
- Pypaftol
- PyPHLAWD
- Pyroms
- PyRosetta
- Pyrpipe
- Pysamstats
- PySLURM
- Python
- Python Modules
- Python-core
- PyTorch
- Pytorch
- PyVCF
- PyVista
- Pyweka
Q
R
- R
- R libraries
- R MPI Example
- R-index
- R8s
- RACA
- Racon
- RADICAL
- Radorgminer
- RaGOO
- Ragout
- RagTag
- Rainbow
- Rainbowfish
- RAiSD
- Randfold
- Ranger
- Rapidnj
- Rapidsai
- Rapidtide
- RAPSearch
- Rascaf
- RATTLE
- RAVE
- Raven
- RAxML
- RAxML-NG
- Razers3
- Rbp-maps
- Rclone
- Rcorrector
- RDKit
- RDnaTools
- Read2tree
- READemption
- REAPR
- Rebaler
- ReCOGnizer
- Recon
- Recycler
- Redis
- REDItools2
- Redundans
- ReFrame
- Regtools
- Release
- Relernn
- RELION
- RelocaTE2
- REMORA
- REPdenovo
- RepeatAnalysis
- RepeatAnalysisTools
- RepeatExplorer
- RepeatMasker
- RepeatModeler
- Repeatscout
- RepeatSeq
- Reptile
- ResFinder
- Resistify
- Resistome
- Resolve
- RevBayes
- RFAA
- RFMIX
- RGAugury
- RGI
- RGIS
- RHash
- RiboCode
- RiboPicker
- RiboTaper
- Ribotricer
- RIGERJ
- RMATS turbo
- RMATS-turbo
- Rmats2sashimiplot
- Rnabloom
- Rnaeditingindexer
- RNAFramework
- RNAhybrid
- Rnalysis
- RNAmmer
- RnaQUAST
- RNAsalsa
- Rnaseqlib
- RNAstructure
- Roary
- Roguenarok
- ROOT
- ROOTPy
- Rosetta
- RoseTTAFold
- Rrnaselector