Genome-wide association analysis of imputed data. ProbABEL software package is used for the analysis of genome-wide imputed SNP data and quantitative, binary, and time-till-event outcomes under linear, logistic, and Cox proportional hazards models, respectively. For quantitative traits, the package also implements a fast two-step mixed model-based score test for association in samples with differential relationships, facilitating analysis in family-based studies, studies performed in human genetically isolated populations and outbred animal populations.
module spider probabel to find out what environment modules are available for this application.
- HPC_PROBABEL_DIR - installation directory
- HPC_PROBABEL_BIN - executable directory
- HPC_PROBABEL_CONF - sample config file directory