Rcorrector

Description

rcorrector website  

Rcorrector(RNA-seq error CORRECTOR) is a kmer-based error correction method for RNA-seq data.

Rcorrector can also be applied to other type of sequencing data where the read coverage is non-uniform, such as single-cell sequencing.

Environment Modules

Run module spider rcorrector to find out what environment modules are available for this application.

System Variables

• HPC_RCORRECTOR_DIR - installation directory
• HPC_RCORRECTOR_BIN - executable directory

Citation

If you publish research that uses rcorrector you have to cite it as follows:

Song, L., Florea, L., Rcorrector: Efficient and accurate error correction for Illumina RNA-seq reads. GigaScience. 2015, 4:48.