RiboTaper is a new analysis pipeline for Ribosome Profiling (Ribo-seq) experiments, which exploits the triplet periodicity of ribosomal footprints to call translated regions.
module spider REPLACE to find out what environment modules are available for this application.
- HPC_REPLACE_DIR - installation directory
- HPC_REPLACE_BIN - executable directory
If you publish research that uses REPLACE you have to cite it as follows:
L.Calviello, N. Mukherjee, E. Wyler, H. Zauber, A. Hirsekorn, M. Selbach, M. Landthaler, B.Obermayer, U. Ohler(2016): Detecting actively translated open reading frames in ribosome profiling data Nature methods