Chan chan PRINSEQ++ is a C++ implementation of the prinseq-lite.pl program. It can be used to filter, reformat or trim genomic and metagenomic sequence data. It is 5X faster than prinseq-lite.pl and uses less RAM thanks to the use of multi-threading and the cboost libraries. It can read and write compressed (gzip) files, drastically reducing the use of hard drive.
module spider prinseq++ to find out what environment modules are available for this application.
- HPC_PRINSEQ++_DIR - installation directory
- HPC_PRINSEQ++_BIN - executable directory