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- 14:30, 6 July 2022 diff hist +1,135 N PGAP Job Scripts Created page with "Return to main PGAP page... ==Script used to test application installation== <pre> #!/bin/bash #SBATCH --job-name=pgap_20220414_test #SBATCH --mail-type=NONE #SBATCH..." current
- 14:29, 6 July 2022 diff hist +3,233 N PGAP Created page with "Category:Software Category:Biology Category:Genomics Category:Annotation Category:Pipeline {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|PGAP}} |{{#va..." current
- 17:09, 14 June 2022 diff hist +2,093 N Hgraph2graph Job Scripts Created page with "Return to the main Hgraph2graph page ==Example of script used to test the application installation== <pre> #!/bin/bash #SBATCH --job-name=hgraph2graph_202104..." current
- 17:06, 14 June 2022 diff hist +2,413 N Hgraph2graph Created page with "Category:Software Category:Chemistry {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|hgraph2graph}} |{{#vardefine:url|https://github.com/wengong-jin/hgraph2graph/}}..." current
- 14:04, 27 May 2022 diff hist +1,216 N SRA-Human-Scrubber Job Scripts Created page with "Return to the SRA-Human-Scrubber main page ==Job script used for testing application installation== <pre> #!/bin/bash #SBATCH --job-name=sra_human_scru..." current
- 14:01, 27 May 2022 diff hist +3,193 N SRA-Human-Scrubber Created page with "Category:Software Category:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SRA-Human-Scrubber}} |{{#vardefine:url|https://github.com/ncbi/sra-human-scrubber..." current
- 18:17, 12 May 2022 diff hist +3,268 N LRBinner Created page with "Category:Software Category:Biology Category:Metagenomics Category:Binning {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|LRBinner}} |{{#vardefine:url|https..."
- 12:52, 2 May 2022 diff hist +532 Structure threader Add info about loading Structure alongside Structure_threader
- 12:34, 2 May 2022 diff hist +1,283 N Structure threader Job Scripts Created page with "Return to main Structure_threader page ==Job script used to test application installation== <pre> #!/bin/bash #SBATCH --job-name=structure_threader_1.3..." current
- 12:33, 2 May 2022 diff hist +2,409 N Structure threader Created page with "Category:Software Category:Utility Category:Wrapper Category:Structure {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Structure_threader}} |{{#vardefine:ur..."
- 16:33, 14 April 2022 diff hist +95 RNAFramework Job Scripts Modified test with a customer-provided (smaller) dataset and workflow current
- 11:57, 14 April 2022 diff hist +1,874 N RNAFramework Job Scripts Created page with "Return to RNAFramework main page == Job script used for testing application installation == <pre> #!/bin/bash #SBATCH --job-name=rnaframework_2.7.2_test #SBA..."
- 11:55, 14 April 2022 diff hist +2,188 N RNAFramework Created page with "Category:Software Category:Biology Category:RNA Category:Sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|RNAFramework}} |{{#vardefine:url|http://..."
- 15:09, 12 April 2022 diff hist +1,151 N Sniffles2 Job Scripts Created page with "Return to main Sniffles2 page == Job Script used for testing application installation == <pre> #!/bin/bash #SBATCH --job-name=sniffles2_2.0.6_test #SBATCH --mai..." current
- 15:07, 12 April 2022 diff hist +2,554 N Sniffles2 Created page with "Category:Software Category:Biology Category:Bioinformatics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Sniffles2}} |{{#vardefine:url|https://github.com/frit..."
- 13:57, 8 April 2022 diff hist +3,009 N MGLTools Created page with "Category:Software Category:Biology Category:Molecular Biology Category:Visualization {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|MGLTools}} |{{#vardefin..."
- 21:16, 6 April 2022 diff hist +1,314 N AutoDock-GPU Job Scripts Created page with "Return to main AutoDock-GPU page ==Job script used for testing application installation== <pre> #!/bin/bash #SBATCH --job-name=autodock-gpu_test #SBATCH --ma..." current
- 21:14, 6 April 2022 diff hist +2,853 N AutoDock-GPU Created page with "Category:Software Category:Molecular Docking {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|AutoDock-GPU}} |{{#vardefine:url|https://github.com/ccsb-scripps/AutoDo..."
- 11:24, 5 April 2022 diff hist +87 SSH Multiplexing
- 16:14, 4 April 2022 diff hist +189 Using SSH Keys To Access HPG
- 14:19, 25 March 2022 diff hist +1,320 N SMC++ Job Scripts Created page with "Return to main SMC++ page == Example job script used for testing application installation == <pre> #!/bin/bash #SBATCH --job-name=smcpp_test #SBATCH --mail-type=NON..." current
- 14:16, 25 March 2022 diff hist +1 m SMC++
- 12:34, 25 March 2022 diff hist -178 m SMC++
- 20:03, 8 March 2022 diff hist +2,763 N HapCUT2 Created page with "Category:Software Category:Biology Category:Genomics Category:Sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|HapCUT2}} |{{#vardefine:url|https:/..." current
- 18:16, 8 March 2022 diff hist +1,581 N RMATS-turbo Job Scripts Created page with "Return to the rMATS-turbo main page ==Job script used for testing application installation:== <pre> #!/bin/bash #SBATCH --job-name=rmats-turbo_test #SBATCH --..." current
- 18:14, 8 March 2022 diff hist +2,517 N RMATS-turbo Created page with "Category:Software Category:Biology Category:Genomics Category:Sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|rMATS-turbo}} |{{#vardefine:url|htt..." current
- 15:11, 28 February 2022 diff hist +1,866 N Cactus Job Scripts Created page with "Return to main Cactus page == Example of the job script that was used for testing Cactus installation: == <pre> #!/bin/bash #SBATCH --job-name=cactus_test #SBATCH..." current
- 15:08, 28 February 2022 diff hist +218 Cactus Add example job script and step-by-step hint
- 13:34, 21 February 2022 diff hist +150 PLAST Updated URL and Citations
- 20:14, 2 February 2022 diff hist +1,543 N IMPUTE5 Job Scripts Created page with "Return to the IMPUTE5 main page ==Example of script used to test application installation== <pre> #!/bin/bash #SBATCH --job-name=impute5_test #SBATCH --mail-type=..." current
- 20:12, 2 February 2022 diff hist +2,958 N IMPUTE5 Created page with "Category:Software Category:Biology Category:Imputation {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|IMPUTE5}} |{{#vardefine:url|https://jmarchini.org/softwar..."
- 18:27, 2 February 2022 diff hist +3,374 N SHAPEIT4 Created page with "Category:Software Category:Biology Category:Sequencing Category:Phasing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SHAPEIT4}} |{{#vardefine:url|https:/..."
- 19:05, 31 January 2022 diff hist +3,405 N QTL-seq Created page with "Category:Software Category:Biology Category:Sequencing Category:Pipeline {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|QTL-seq}} |{{#vardefine:url|https:/..." current
- 13:30, 28 January 2022 diff hist +2 m ParaView
- 13:28, 28 January 2022 diff hist +70 ParaView Job Scripts
- 13:17, 28 January 2022 diff hist +109 m ParaView Clarify "sbatch " command
- 22:13, 27 January 2022 diff hist +565 N ParaView Job Scripts Created page with "==ParaView server single node with 32 cores and a GPU== <pre> #!/bin/bash #SBATCH --job-name=paraview_server_test #SBATCH --mail-type=NONE #SBATCH --ntasks=1 #SBATCH --cpus-pe..."
- 22:11, 27 January 2022 diff hist +3,090 ParaView Add section for client/server mode
- 15:07, 25 January 2022 diff hist +1 VirSieve
- 20:28, 24 January 2022 diff hist +3,683 N VirSieve Created page with "Category:Software Category:Biology Category:Pipeline Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|VirSieve}} |{{#vardefine:url|https://..."
- 13:33, 21 January 2022 diff hist +2,385 N Modulus Created page with "Category:Software Category:Physics Category:AI Category:NVIDIA {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Modulus}} |{{#vardefine:url|https://developer..."
- 18:18, 20 January 2022 diff hist +378 Tensorboard Clarify some instructions based on user feedback.
- 17:57, 20 January 2022 diff hist +2 Tensorboard Undo revision 21761: the ampersand is intentional and required to background the TensorBoard process and allow the user to start Firefox without needing to open an additional terminal Tag: Undo
- 15:26, 20 January 2022 diff hist 0 m Sample SLURM Scripts →GPU job
- 22:59, 18 January 2022 diff hist +2,573 N Compacta Created page with "Category:Software Category:Biology Category:Contig {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Compacta}} |{{#vardefine:url|https://github.com/bioCompU/Comp..."
- 16:55, 14 January 2022 diff hist +50 Remote Support
- 21:50, 13 January 2022 diff hist +3,974 N Mikado Created page with "Category:Software Category:Biology Category:Genetics Category:Transcripts Category:Pipeline {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Mikado}} |{{..."
- 16:54, 7 January 2022 diff hist +2,521 N SCOP Created page with "Category:Software Category:Biology Category:Scaffolding Category:Assembly {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SCOP}} |{{#vardefine:url|https://g..."
- 18:14, 4 January 2022 diff hist +252 SLAW Add example job script
- 17:04, 4 January 2022 diff hist +2,865 N SLAW Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SLAW}} |{{#vardefine:url|https://github.com/zamboni-lab/SLAW}} <!--CONFIGURATION: OPTIONAL (|1}} means..."
- 19:29, 6 December 2021 diff hist +52 m EggNOG-mapper Added env variable for default database location current
- 19:28, 6 December 2021 diff hist +773 EggNOG-mapper Updated citations
- 13:43, 3 December 2021 diff hist +6 m DAKOTA
- 13:42, 3 December 2021 diff hist +256 m DAKOTA Update module dependencies for various versions
- 13:32, 3 December 2021 diff hist +745 m DAKOTA Add citation information from website
- 13:26, 3 December 2021 diff hist -9 m DAKOTA Update URL
- 13:42, 1 December 2021 diff hist +699 Modules Basic Usage Add note about the error message when there are module family conflicts
- 13:31, 1 December 2021 diff hist +57 Modules Basic Usage Clarified note on loading specific module versions
- 16:01, 24 November 2021 diff hist +138 YAGO
- 15:57, 24 November 2021 diff hist +3,529 N YAGO Created page with "Category:Software Category:Data {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|YAGO}} |{{#vardefine:url|https://github.com/yago-naga/yago4}} <!--CONFIGURATION: OPT..."
- 16:54, 22 November 2021 diff hist -51 m WaveGAN
- 16:48, 22 November 2021 diff hist +2,530 N WaveGAN Created page with "Category:Software Category:Machine Learning Category:Audio Category:GAN Category:Synthesis {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|WaveGAN}} |{{..."
- 18:32, 17 November 2021 diff hist +2,574 N Hapbin Created page with "Category:Software Category:Biology Category:Genetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|hapbin}} |{{#vardefine:url|https://github.com/evotools/hapb..."
- 15:40, 17 November 2021 diff hist -22 m AdmixTools Updated URL
- 15:33, 26 October 2021 diff hist 0 SSH Multiplexing
- 15:30, 26 October 2021 diff hist +164 Plink Add links to 1.x versus 2.x documentation
- 14:40, 26 October 2021 diff hist -9 Plink Update URL
- 17:59, 25 October 2021 diff hist +2,383 N Convert3D Created page with "Category:Software Category:Imaging Category:Data Conversion {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Convert3D}} |{{#vardefine:url|https://sourceforge.ne..."
- 16:48, 25 October 2021 diff hist +3,247 N PICSL Created page with "Category:Software Category:Imaging Category:Atlas Category:Segmentation {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|PICSL}} |{{#vardefine:url|https://ww..."
- 17:42, 19 October 2021 diff hist +16 m Hail Make log and temp example paths more generic current
- 17:34, 19 October 2021 diff hist +2,863 N Hail Created page with "Category:Software Category:Biology Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Hail}} |{{#vardefine:url|https://hail.is/}} <!--CONFIGURATI..."
- 20:57, 12 October 2021 diff hist +53 MRtrix
- 20:44, 12 October 2021 diff hist +336 MRtrix
- 15:38, 6 October 2021 diff hist +2,874 N DeSALT Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|deSALT}} |{{#vardefine:url|https://github.com/ydLiu-HIT/deSALT}} <!--CONFIGURATION: OPTIONAL (|1}} mea..."
- 21:00, 1 October 2021 diff hist +2,940 N MET Created page with "Category:Software Category:Meteorology Category:Models Category:Validation {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|MET}} |{{#vardefine:url|https://m..."
- 18:03, 28 September 2021 diff hist +3,842 N Appreci8 Created page with "Category:Software Category:Biology Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Appreci8}} |{{#vardefine:url|https://imigitlab.uni-muenster..."
- 18:57, 17 September 2021 diff hist +2,779 N BatMeth2 Created page with "Category:Software Category:Biology Category:Genomics Category:Mapping {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|BatMeth2}} |{{#vardefine:url|https://b..." current
- 13:41, 17 September 2021 diff hist +51 RNAstructure Add link to tool list
- 13:36, 17 September 2021 diff hist +2,939 N RNAstructure Created page with "Category:Software Category:Biology Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|RNAstructure}} |{{#vardefine:url|http://rna.urmc.rochester...."
- 17:31, 2 September 2021 diff hist +276 SLURM Job Arrays Add note about reducing tasks count on a running job
- 14:25, 1 September 2021 diff hist -2,696 Newick-utils Replaced with redirect to divergent page current Tag: New redirect
- 14:10, 1 September 2021 diff hist +503 Newick utils current
- 20:11, 19 August 2021 diff hist +2,796 N LCModel Created page with "Category:Software Category:Neuroimaging {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|LCModel}} |{{#vardefine:url|http://s-provencher.com/lcmodel.shtml}} <!--CONF..."
- 18:27, 19 August 2021 diff hist +2,958 N SMR Created page with "Category:Software Category:Biology Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SMR}} |{{#vardefine:url|https://cnsgenomics.com/software/sm..." current
- 16:05, 17 August 2021 diff hist +2,511 N Trim isoseq polya Created page with "Category:Software Category:Biology Category:Genetics Category:Sequencing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|trim_isoseq_polyA}} |{{#vardefine:u..."
- 12:27, 6 August 2021 diff hist +4,268 N PyHIST Created page with "Category:Software Category:Imaging Category:Histology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|PyHIST}} |{{#vardefine:url|https://pyhist.readthedocs.io/e..."
- 18:01, 4 August 2021 diff hist 0 m GDrive Johnbullard moved page Draft:GDrive to GDrive
- 20:45, 3 August 2021 diff hist +2,581 N SeSiMCMC Created page with "Category:Software Category:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|SeSiMCMC}} |{{#vardefine:url|http://favorov.bioinfolab.net/SeSiMCMC/}} <!--CONFIG..."
- 17:51, 3 August 2021 diff hist +35 GDrive
- 17:25, 3 August 2021 diff hist +6 GDrive
- 17:22, 3 August 2021 diff hist +2,301 GDrive
- 16:04, 3 August 2021 diff hist 0 m GDrive Johnbullard moved page GDrive to Draft:GDrive without leaving a redirect: Make draft
- 16:03, 3 August 2021 diff hist +3,546 N GDrive Created page with "Category:Software Category:Transfer Data {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|GDrive}} |{{#vardefine:url|https://github.com/prasmussen/gdrive}} <!--CONFI..."
- 13:26, 3 August 2021 diff hist +8 m GDB
- 12:59, 3 August 2021 diff hist 0 m GDB
- 12:52, 3 August 2021 diff hist +1,079 GDB
- 20:55, 19 July 2021 diff hist +2,359 N Orthofisher Created page with "Category:Software Category:Biology Category:Genetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Orthofisher}} |{{#vardefine:url|https://jlsteenwyk.com/orth..."
- 20:14, 7 July 2021 diff hist +164 Themisto
- 18:44, 2 July 2021 diff hist +2,433 N Kalign Created page with "Category:Software Category:Biology Category:Bioinformatics Category:Sequencing Category:Alignment {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Kalign..."
- 12:01, 1 July 2021 diff hist +3,160 N PHYling Created page with "Category:Software Category:Biology Category:Phylogenetics Category:Markers Category:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|PHYling}} |..."