Search results

PRINSEQ
[[Category:Software]][[Category:Biology]][[Category:Sequencing]]

2 KB (271 words) - 15:52, 10 June 2022
HyDe
[[Category:Software]][[Category:Phylogenetics]] HyDe is a software package that detects hybridization in phylogenomic data sets using phylogen

3 KB (301 words) - 20:41, 30 September 2020
OmniCLIP
[[Category:Software]][[Category:Phylogenetics]]

2 KB (257 words) - 14:52, 12 November 2020
TreeTime
[[Category:Software]][[Category:Phylogenetics]]

3 KB (370 words) - 17:44, 2 November 2020
AMAS
[[Category:Software]][[Category:Phylogenetics]]

2 KB (250 words) - 12:38, 12 August 2022
CIMS
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

3 KB (315 words) - 17:21, 10 June 2022
Ngscheckmate
[[Category:Software]][[Category:Phylogenetics]] NGSCheckMate is a software package for identifying next generation sequencing (NGS) data files from th

3 KB (390 words) - 18:12, 27 May 2022
Assexon
[[Category:Software]][[Category:Phylogenetics]]

2 KB (243 words) - 20:17, 10 February 2020
Fdupes
[[Category:Software]][[Category:File Management]]

2 KB (241 words) - 13:53, 21 October 2022
PyTorch
[[Category:Software]][[Category:Library]][[Category:Math]] ...neural networks and deep learning. PyTorch also has a large user base and software ecosystem.

5 KB (691 words) - 16:39, 14 December 2022
Pychopper
[[Category:Software]][[Category:Phylogenetics]][[Category:Sequencing]]

2 KB (262 words) - 18:12, 27 July 2022
Appreci8
[[Category:Software]]

4 KB (561 words) - 14:25, 12 August 2022
Software Development
#REDIRECT [[Software Development Policies]]

43 bytes (4 words) - 20:46, 6 June 2022
Peneasy
[[Category:Software]]

4 KB (460 words) - 18:26, 27 May 2022
Rebaler
[[Category:Software]][[Category:Phylogenetics]]

2 KB (252 words) - 18:00, 1 June 2022
MMSEQ
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

3 KB (387 words) - 20:50, 18 August 2022
Mvftools
[[Category:Software]][[Category:Phylogenetics]]

3 KB (370 words) - 13:58, 30 April 2020
VarSimLab
[[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Simulation]]

3 KB (420 words) - 17:24, 22 August 2022
WIsH
[[Category:Software]][[Category:Phylogenetics]]

2 KB (243 words) - 21:29, 6 December 2019
Pharmcat
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

3 KB (288 words) - 20:19, 12 August 2022
Sra-human-scrubber
[[Category:Software]][[Category:Genomics]]

3 KB (395 words) - 15:57, 22 August 2022
Phyx
[[Category:Software]][[Category:Phylogenetics]]

2 KB (264 words) - 18:23, 21 August 2022
Mvrsion
[[Category:Software]][[Category:Sequencing]]

2 KB (246 words) - 14:24, 29 November 2022
ABruijn
[[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Genomics]]

3 KB (354 words) - 20:09, 24 August 2022
Coreutils
[[Category:Software]][[Category:Utility]] |{{#vardefine:url|https://www.gnu.org/software/coreutils/}}

2 KB (301 words) - 14:09, 15 August 2022
Supercell
[[Category:Software]][[Category:Biology]][[Category:NGS]]

2 KB (281 words) - 16:55, 10 June 2022
DECX
[[Category:Software]][[Category:Phylogenetics]]

2 KB (255 words) - 17:54, 26 April 2021
Category:Phylogenetics
[[Category:Biology]][[Category:Software]][[Category:Research]] Phylogenetics software and documentation

766 members (0 subcategories, 0 files) - 21:43, 24 October 2022
MOTU
[[Category:Software]][[Category:Biology]][[Category:Genomics]] |{{#vardefine:url|http://www.bork.embl.de/software/mOTU/}}

3 KB (328 words) - 12:00, 19 August 2022
GTOOL
[[Category:Software]][[Category:Phylogenetics]] |{{#vardefine:url|https://www.well.ox.ac.uk/~cfreeman/software/gwas/gtool.html}}

3 KB (319 words) - 12:51, 10 September 2020
Prodigal
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

2 KB (237 words) - 14:37, 10 June 2022
MIA
[[Category:Software]][[Category:Biology]][[Category:NGS]]

3 KB (347 words) - 19:52, 12 August 2022
Juicer
[[Category:Software]][[Category:Genomics]]

3 KB (369 words) - 16:29, 15 October 2023
Bifrost
[[Category:Software]][[Category:Phylogenetics]]

2 KB (248 words) - 21:11, 6 December 2019
Emerald
[[Category:Software]][[Category:Biology]]

3 KB (324 words) - 19:16, 29 October 2023
Ms
[[Category:Software]][[Category:Phylogenetics]]

2 KB (269 words) - 12:30, 19 August 2022
SSM
[[Category:Software]][[Category:Phylogenetics]]

2 KB (245 words) - 13:48, 10 June 2021
LongQC
[[Category:Software]][[Category:Phylogenetics]]

2 KB (286 words) - 14:52, 12 October 2021
FastStructure
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

3 KB (297 words) - 18:54, 12 August 2022
EAGLE
[[Category:Software]][[Category:Phylogenetics]] The Enhanced Artificial Genome Engine (EAGLE) software is designed to simulate the behaviour of Illumina's Next Generation Sequenc

2 KB (266 words) - 22:29, 26 August 2020
MrBayes
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

3 KB (314 words) - 12:28, 19 August 2022
BLASR
[[Category:Software]][[Category:Biology]][[Category:NGS]]

2 KB (236 words) - 18:17, 12 August 2022
MiniCaller
[[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Phylogenetics]]

2 KB (273 words) - 19:52, 12 August 2022
Hgtector
[[Category:Software]][[Category:biology]][[Category:sequencing]]

2 KB (253 words) - 17:04, 10 October 2022
Mopac
[[Category:Software]] MOPAC[1], the Molecular Orbital PACkage, is software for performing quantum chemistry calculations based on semiempirical thermo

3 KB (292 words) - 15:05, 8 April 2024
Category:Fluid Dynamics
[[Category:Software]]

7 members (0 subcategories, 0 files) - 19:53, 22 August 2022
Monai
[[Category:Software]][[Category:Healthcare]]

6 KB (884 words) - 17:46, 5 May 2023
FastQC
[[Category:Software]][[Category:Biology]][[Category:NGS]]

3 KB (382 words) - 15:25, 15 August 2022
Gubbins
[[Category:Software]][[Category:Phylogenetics]]

3 KB (335 words) - 17:28, 15 August 2022
HLAminer
[[Category:Software]][[Category:Phylogenetics]][[Category:Biology]]

4 KB (541 words) - 14:55, 14 December 2022
Category:Audio
[[Category:Software]]

3 members (0 subcategories, 0 files) - 17:20, 3 June 2022
VS Code Remote Development
* By using the software, you agree to

7 KB (1,100 words) - 17:42, 5 March 2024
Porechop
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

2 KB (294 words) - 21:23, 6 December 2019
AlphaPulldown
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] If you use this software, please cite it along the dependencies it uses internally, at least:

3 KB (300 words) - 14:11, 10 July 2023
Tcoffee
[[Category:Software]][[Category:Biology]]

2 KB (280 words) - 20:46, 12 August 2022
Csvtk
[[Category:Software]][[Category:Biology]]

2 KB (260 words) - 18:44, 12 August 2022
Stacks
[[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:NGS]] Stacks is a software pipeline for building loci out of a set of short-read sequenced samples. St

4 KB (658 words) - 21:20, 2 January 2023
IGB
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

2 KB (257 words) - 18:41, 15 August 2022
Medaka
[[Category:Software]][[Category:Genomics]][[Category:Biology]]

2 KB (290 words) - 14:37, 21 August 2023
Gzip
[[Category:Software]][[Category:Compression]] |{{#vardefine:url|https://www.gnu.org/software/gzip/}}

2 KB (252 words) - 18:11, 15 August 2022
RNAhybrid
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

2 KB (285 words) - 20:56, 12 August 2022
FEniCS
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

3 KB (301 words) - 21:20, 6 December 2019
Tapestri
[[Category:Software]][[Category:Phylogenetics]]

2 KB (258 words) - 19:07, 1 June 2022
ROOTPy
[[Category:Software]][[Category:Data Science]]

3 KB (389 words) - 16:49, 21 August 2022
Metashape
[[Category:Software]] Agisoft Metashape is a stand-alone software product that performs photogrammetric processing of digital images and gene

2 KB (280 words) - 15:35, 14 March 2023
MSMBuilder
[[Category:Software]][[Category:Molecular Dynamics]] |{{#vardefine:exe|1}} 

2 KB (288 words) - 16:38, 10 June 2022
REAPR
[[Category:Software]][[Category:Biology]][[Category:Assembly]] |{{#vardefine:url|http://www.sanger.ac.uk/resources/software/reapr/#t_2}}

3 KB (320 words) - 21:35, 21 August 2022
Bamsurgeon
[[Category:Software]][[Category:Phylogenetics]]

2 KB (249 words) - 15:29, 22 September 2020
CLIPper
[[Category:Software]][[Category:Phylogenetics]]

2 KB (277 words) - 13:44, 15 August 2022
MiRDP2
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

3 KB (328 words) - 18:09, 31 May 2022
Mlst
[[Category:Software]][[Category:Phylogenetics]]

2 KB (244 words) - 21:22, 6 December 2019
Clairvoyante
[[Category:Software]][[Category:Phylogenetics]]

4 KB (453 words) - 13:39, 15 August 2022
VirusFinder
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] VirusFinder 2 is a new software tool for characterizing intra-host viruses through next generation sequenci

3 KB (410 words) - 21:29, 6 December 2019
GenomeScope2
[[Category:Software]][[Category:Phylogenetics]]

3 KB (308 words) - 22:07, 15 March 2022
RMATS turbo
[[Category:Software]][[Category:Biology]][[Category:Sequencing]][[Category:Genomics]]

2 KB (289 words) - 19:26, 2 June 2022
Fqtools
[[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] fqtools is a software suite for fast processing of FASTQ files. Various file manipulations are su

3 KB (359 words) - 16:47, 15 August 2022
ReCOGnizer
[[Category:Software]][[Category:Phylogenetics]]

3 KB (327 words) - 17:03, 3 December 2020
Samtools
[[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Sequencing]] |{{#vardefine:exe|}} 

3 KB (357 words) - 22:04, 21 August 2022
Nanodisco
[[Category:Software]][[Category:Phylogenetics]]

3 KB (326 words) - 14:37, 27 August 2021
PhaME
[[Category:Software]][[Category:phylogenetics]]

2 KB (287 words) - 14:18, 9 March 2020
NCBI GenBank Tools
[[Category:Software]][[Category:Biology]][[Category:Healthcare]]

2 KB (291 words) - 14:33, 19 August 2022
MapThin
[[Category:Software]][[Category:Phylogenetics]]

2 KB (258 words) - 21:21, 6 December 2019
Sniffles2
[[Category:Software]]

2 KB (291 words) - 20:42, 12 August 2022
QIIME2
[[Category:Software]][[Category:Biology]][[Category:genomics]] ...for Quantitative Insights Into Microbial Ecology. QIIME is an open source software package for comparison and analysis of microbial communities, primarily bas

3 KB (435 words) - 15:15, 19 August 2022
Racon
[[Category:Software]][[Category:Phylogenetics]]

3 KB (364 words) - 21:24, 21 August 2022
InParanoid
[[Category:Software]][[Category:Biology]]

2 KB (236 words) - 19:20, 12 August 2022
Merge peaks
[[Category:Software]][[Category:Workflow Automation]]

2 KB (254 words) - 18:51, 15 August 2022
HDF5
[[Category:Software]][[Category:Library]][[Category:Data Science]] |{{#vardefine:exe|}} 

2 KB (326 words) - 18:16, 15 August 2022
MODELTEST
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

2 KB (277 words) - 16:18, 10 June 2022
NanoCount
[[Category:Software]][[Category:Phylogenetics]]

2 KB (268 words) - 20:28, 14 May 2020
NGS-SDK
[[Category:Software]][[Category:biology]][[Category:Healthcare]][[Category:library]][[Category:

3 KB (320 words) - 17:11, 19 August 2022
PsRobot
[[Category:Software]][[Category:Phylogenetics]]

2 KB (242 words) - 17:12, 1 June 2022
Bwa-mem2
[[Category:Software]][[Category:Phylogenetics]]

3 KB (361 words) - 16:11, 27 May 2022
GMP
[[Category:Software]][[Category:Library]]

3 KB (373 words) - 13:43, 3 June 2022
NtEdit
[[Category:Software]][[Category:Phylogenetics]]

3 KB (316 words) - 21:23, 6 December 2019
EvoLSTM
[[Category:Software]][[Category:Biology]]

3 KB (309 words) - 18:52, 12 August 2022
Mykrobe
[[Category:Software]]

2 KB (246 words) - 16:37, 21 June 2023
Finder
[[Category:Software]] independent software that generatess gene annotations in GTF format. finder

3 KB (345 words) - 16:42, 15 August 2022
Espresso SLURM
[[Category:Software]]

1 KB (144 words) - 21:20, 8 November 2022
Prokka
[[Category:Software]][[Category:Biology]][[Category:Assembly]][[Category:Genomics]] |{{#vardefine:url|http://www.vicbioinformatics.com/software.prokka.shtml}}

2 KB (297 words) - 19:41, 21 August 2022

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