GTOOL can be used to create subsets of datasets using the -S option in conjunction with several sub-options. These options are illustrated in the following examples. In these examples the genotype and sample files to be subsetted are specified using the --g and --s options. The genotype and sample files should be in the format specified by the FILE FORMAT webpage.
module spider gtool to find out what environment modules are available for this application.
- HPC_GTOOL_DIR - installation directory
- HPC_GTOOL_BIN - executable directory
- HPC_GTOOL_DOC - documentation directory
- HPC_GTOOL_EXE - example directory