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- 17:00, 4 March 2021 diff hist +72 Deprecation
- 15:06, 4 March 2021 diff hist +3,157 N SRAssembler Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|srassembler}} |{{#vardefine:url|https://github.com/BrendelGroup/SRAssembler}..."
- 14:17, 4 March 2021 diff hist +29 Deprecation
- 20:09, 2 March 2021 diff hist +54 CLIPper
- 13:48, 26 February 2021 diff hist +2,282 N KofamScan Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|kofamscan}} |{{#vardefine:url|https://github.com/takaram/kofam_scan}} <!--CO..." current
- 20:27, 25 February 2021 diff hist 0 Deprecation →Apps and Databases to Remove
- 18:58, 25 February 2021 diff hist +15 Deprecation
- 22:24, 24 February 2021 diff hist -2 Julia
- 22:24, 24 February 2021 diff hist +183 Julia
- 19:05, 24 February 2021 diff hist +11 Deprecation
- 19:05, 24 February 2021 diff hist +15 Deprecation
- 19:35, 23 February 2021 diff hist +2,347 N MAGMA-GWAS Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|magma-gwas}} |{{#vardefine:url|https://ctg.cncr.nl/software/magma}} <!--CONF..." current
- 15:00, 23 February 2021 diff hist +2,548 N Nilearn Created page with "Category:SoftwareCategory:Machine Learning {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nilearn}} |{{#vardefine:url|https://github.com/nilearn/nilearn}} <!--CONF..."
- 21:06, 22 February 2021 diff hist +25 Deprecation
- 19:25, 18 February 2021 diff hist -1 Simka current
- 19:25, 18 February 2021 diff hist +2,300 N Simka Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|simka}} |{{#vardefine:url|https://github.com/GATB/simka}} <!--CONFIGURATION:..."
- 14:27, 17 February 2021 diff hist +2,253 N DSRC Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|dsrc}} |{{#vardefine:url|https://github.com/refresh-bio/DSRC}} <!--CONFIGURA..." current
- 21:03, 12 February 2021 diff hist +54 VeryFastTree current
- 21:03, 12 February 2021 diff hist +2,780 N VeryFastTree Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|veryfasttree}} |{{#vardefine:url|https://github.com/citiususc/veryfasttree}}..."
- 19:26, 11 February 2021 diff hist -8 Singularity
- 19:26, 11 February 2021 diff hist +81 Singularity
- 20:12, 8 February 2021 diff hist +2,690 N TRUST4 Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|trust4}} |{{#vardefine:url|https://github.com/liulab-dfci/TRUST4}} <!--CONFI..." current
- 17:02, 2 February 2021 diff hist +1 UShER
- 17:02, 2 February 2021 diff hist +3,325 N UShER Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|usher}} |{{#vardefine:url|https://github.com/yatisht/usher}} <!--CONFIGURATI..."
- 14:26, 1 February 2021 diff hist +64 PRSice current
- 14:26, 1 February 2021 diff hist +1 PRSice
- 14:26, 1 February 2021 diff hist +2,459 N PRSice Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|prsice}} |{{#vardefine:url|https://www.prsice.info/}} <!--CONFIGURATION: OPT..."
- 17:40, 29 January 2021 diff hist +2,590 N QUIP Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|quip}} |{{#vardefine:url|https://libatoms.github.io/GAP/index.html}} <!--CONFIGURATION: OPTIONAL (|1}}..."
- 18:12, 28 January 2021 diff hist +2,371 N Azoo Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|azoo}} |{{#vardefine:url|https://pypi.org/project/azoo/}} <!--CONFIGURATION: OPTIONAL (|1}} means it's..."
- 15:38, 28 January 2021 diff hist +2,267 N Pangolin Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pangolin}} |{{#vardefine:url|https://github.com/cov-lineages/pangolin`}} <!-..." current
- 18:45, 27 January 2021 diff hist +3,011 N Viralmsa Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|viralmsa}} |{{#vardefine:url|https://github.com/niemasd/ViralMSA}} <!--CONFI..."
- 14:44, 26 January 2021 diff hist +2,547 N Scallop Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|scallop}} |{{#vardefine:url|https://github.com/Kingsford-Group/scallop}} <!-..." current
- 18:17, 25 January 2021 diff hist -5 BEAST
- 18:16, 25 January 2021 diff hist +137 BEAST
- 16:32, 22 January 2021 diff hist +56 Poretools
- 14:51, 20 January 2021 diff hist +2,808 N Meta-Marc Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|meta-marc}} |{{#vardefine:url|https://github.com/lakinsm/meta-marc}} <!--CON..." current
- 19:23, 19 January 2021 diff hist +28 Deprecation
- 19:12, 19 January 2021 diff hist +42 Deprecation
- 15:29, 19 January 2021 diff hist +2,390 N FastqPuri Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|fastqpuri}} |{{#vardefine:url|https://github.com/jengelmann/FastqPuri}} <!--..." current
- 16:54, 15 January 2021 diff hist +1 QAPA current
- 16:53, 15 January 2021 diff hist +2,646 N QAPA Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|qapa}} |{{#vardefine:url|https://github.com/morrislab/qapa}} <!--CONFIGURATI..."
- 19:25, 11 January 2021 diff hist +2,376 N Wgd Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|wgd}} |{{#vardefine:url|https://github.com/arzwa/wgd}} <!--CONFIGURATION: OP..."
- 19:43, 15 December 2020 diff hist +100 Mlpack current
- 19:43, 15 December 2020 diff hist -17 Mlpack
- 19:42, 15 December 2020 diff hist +2,478 N Mlpack Created page with "Category:SoftwareCategory:Library {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|https://www.mlpack.org/}} |{{#vardefine:url|https://www.mlpack.org/"}} <!--CONFIGU..."
- 22:29, 9 December 2020 diff hist +2,212 N SpeedSeq Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|speedseq}} |{{#vardefine:url|https://github.com/hall-lab/speedseq}} <!--CONF..." current
- 17:03, 3 December 2020 diff hist +2,782 N ReCOGnizer Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|recognizer}} |{{#vardefine:url|https://github.com/iquasere/reCOGnizer}} <!--..." current
- 15:35, 2 December 2020 diff hist +2,618 N CDBFasta Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|cdbfasta}} |{{#vardefine:url|https://github.com/gpertea/cdbfasta}} <!--CONFI..." current
- 13:55, 30 November 2020 diff hist +2,633 N NextPolish Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nextpolish}} |{{#vardefine:url|https://github.com/Nextomics/NextPolish}} <!-..." current
- 16:12, 24 November 2020 diff hist +2,466 N Shortbred Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|shortbred}} |{{#vardefine:url|https://github.com/biobakery/shortbred}} <!--C..." current
- 14:53, 24 November 2020 diff hist +2,232 N CONNECT Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|connect}} |{{#vardefine:url|https://github.com/HKU-BAL/CONNET}} <!--CONFIGUR..." current
- 15:48, 17 November 2020 diff hist +2,363 N Nonpareil Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nonpareil}} |{{#vardefine:url|https://nonpareil.readthedocs.io/en/latest/ind..." current
- 15:33, 16 November 2020 diff hist +3,212 N Metacrast Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|metacrast}} |{{#vardefine:url|https://github.com/molleraj/MetaCRAST}} <!--CO..."
- 18:03, 13 November 2020 diff hist +2,223 N Fastai Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|fastai}} |{{#vardefine:url|https://github.com/fastai/fastai}} <!--CONFIGURAT..." current
- 14:52, 12 November 2020 diff hist +2,274 N OmniCLIP Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|omniclip}} |{{#vardefine:url|https://github.com/philippdre/omniCLIP}} <!--CO..." current
- 14:40, 12 November 2020 diff hist +2,266 N GoPHY Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|gophy}} |{{#vardefine:url|https://github.com/FePhyFoFum/gophy}} <!--CONFIGUR..." current
- 14:48, 10 November 2020 diff hist +2,616 N Finemap Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|finemap}} |{{#vardefine:url|http://www.christianbenner.com/}} <!--CONFIGURAT..." current
- 19:56, 6 November 2020 diff hist +2,496 N Pggb Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pggb}} |{{#vardefine:url|https://github.com/pangenome/pggb}} <!--CONFIGURATI..." current
- 16:58, 6 November 2020 diff hist +2,214 N PBCCS Created page with "Category:SoftwareCategory:PacBio {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pbccs}} |{{#vardefine:url|https://github.com/PacificBiosciences/ccs}} <!--CONFIGURA..."
- 16:57, 6 November 2020 diff hist +2,592 N Lima Created page with "Category:SoftwareCategory:PacBio {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|lima}} |{{#vardefine:url|https://github.com/pacificbiosciences/barcoding/}} <!--CON..."
- 19:43, 4 November 2020 diff hist +2,477 N Edyeet Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|edyeet}} |{{#vardefine:url|https://github.com/ekg/edyeet}} <!--CONFIGURATION..." current
- 21:58, 3 November 2020 diff hist +2,259 N DoGFinder Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|dogfinder}} |{{#vardefine:url|https://github.com/shalgilab/DoGFinder}} <!--C..." current
- 14:47, 3 November 2020 diff hist +2,875 N Pufferfish Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pufferfish}} |{{#vardefine:url|https://github.com/COMBINE-lab/pufferfish}} <..."
- 13:45, 3 November 2020 diff hist +2,865 N PolyGembler Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|polygembler}} |{{#vardefine:url|https://github.com/c-zhou/polyGembler}} <!--..." current
- 17:44, 2 November 2020 diff hist +3,020 N TreeTime Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|treetime}} |{{#vardefine:url|https://github.com/neherlab/treetime}} <!--CONF..." current
- 16:32, 2 November 2020 diff hist +2,871 N Sabre Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|sabre}} |{{#vardefine:url|https://github.com/najoshi/sabre}} <!--CONFIGURATI..." current
- 00:09, 29 October 2020 diff hist +1 PhyloFlash current
- 00:09, 29 October 2020 diff hist +2,467 N PhyloFlash Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|phyloflash}} |{{#vardefine:url|https://github.com/HRGV/phyloFlash}} <!--CONF..."
- 13:11, 21 October 2020 diff hist +2,656 N Cvbio Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|cvbio}} |{{#vardefine:url|https://github.com/clintval/cvbio}} <!--CONFIGURAT..." current
- 20:19, 19 October 2020 diff hist +2,541 N Bamaddrg Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|bamaddrg}} |{{#vardefine:url|https://github.com/ekg/bamaddrg}} <!--CONFIGURA..." current
- 13:24, 19 October 2020 diff hist +1 IsONclust current
- 13:24, 19 October 2020 diff hist +2,650 N IsONclust Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|isonclust}} |{{#vardefine:url|https://github.com/ksahlin/isONclust}} <!--CON..."
- 20:52, 15 October 2020 diff hist -10 GUI Programs →Start Session
- 20:49, 15 October 2020 diff hist +166 GUI Programs →Start Session
- 19:03, 14 October 2020 diff hist +2,877 N Parabricks Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|parabricks}} |{{#vardefine:url|https://www.nvidia.com/en-us/docs/parabricks/..."
- 15:04, 13 October 2020 diff hist -12 VCF-kit
- 14:25, 12 October 2020 diff hist +2,740 N GeneRax Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|generax}} |{{#vardefine:url|https://github.com/BenoitMorel/GeneRax}} <!--CON..." current
- 14:32, 9 October 2020 diff hist +3,858 N PsiCLASS Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|psiclass}} |{{#vardefine:url|https://github.com/splicebox/PsiCLASS}} <!--CON..."
- 13:40, 8 October 2020 diff hist +54 ASTRID
- 13:29, 8 October 2020 diff hist +1 Nubeamdedup
- 13:29, 8 October 2020 diff hist +2,510 N Nubeamdedup Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nubeamdedup}} |{{#vardefine:url|https://github.com/daihang16/nubeamdedup}} <!--CONFIGURATION: OPTIONAL..."
- 15:05, 6 October 2020 diff hist +8 Guppy
- 20:18, 1 October 2020 diff hist +2,723 N AliStat Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|alistat}} |{{#vardefine:url|https://github.com/thomaskf/AliStat}} <!--CONFIG..." current
- 14:50, 1 October 2020 diff hist +51 HipSTR current
- 14:44, 1 October 2020 diff hist +110 HipSTR
- 14:42, 1 October 2020 diff hist +2,695 N HipSTR Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|hipstr}} |{{#vardefine:url|https://github.com/tfwillems/HipSTR}} <!--CONFIGU..."
- 20:41, 30 September 2020 diff hist +2,580 N HyDe Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|hyde}} |{{#vardefine:url|https://github.com/pblischak/HyDe}} <!--CONFIGURATI..." current
- 20:15, 29 September 2020 diff hist +2,247 N Libint Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|libint}} |{{#vardefine:url|https://github.com/evaleev/libint}} <!--CONFIGURA..."
- 20:14, 29 September 2020 diff hist +2,409 N LEfSe Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|lefse}} |{{#vardefine:url|https://bioconda.github.io/recipes/lefse/README.ht..." current
- 20:13, 29 September 2020 diff hist +2,368 N Lbzip Created page with "Category:SoftwareCategory:Compressor {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|lbzip}} |{{#vardefine:url|http://lbzip2.org/}} <!--CONFIGURATION: OPTIONAL (|1}..."
- 20:11, 29 September 2020 diff hist +21 N DeepBGC Maxprok moved page DeepBGC to Deepbgc current Tag: New redirect
- 20:11, 29 September 2020 diff hist 0 m Deepbgc Maxprok moved page DeepBGC to Deepbgc current
- 19:52, 29 September 2020 diff hist +2,298 N Pysamstats Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pysamstat}} |{{#vardefine:url|https://github.com/alimanfoo/pysamstats}} <!--..." current
- 17:02, 29 September 2020 diff hist +2,264 N Assemblytics Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|assymblytics}} |{{#vardefine:url|https://github.com/MariaNattestad/Assemblyt..." current
- 20:08, 25 September 2020 diff hist +2 Deepbgc
- 20:08, 25 September 2020 diff hist +30 Deepbgc
- 13:56, 25 September 2020 diff hist +2,882 N PyVista Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pyvista}} |{{#vardefine:url|https://docs.pyvista.org/}} <!--CONFIGURATION: O..." current
- 20:47, 24 September 2020 diff hist +2,958 N Badread Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|badread}} |{{#vardefine:url|https://github.com/rrwick/Badread}} <!--CONFIGUR..." current
- 16:38, 24 September 2020 diff hist +224 FLAIR
- 16:38, 24 September 2020 diff hist +2,402 N FLAIR Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|flair}} |{{#vardefine:url|https://github.com/BrooksLabUCSC/flair}} <!--CONFI..."