Simka

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Description

simka website  

Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.

Environment Modules

Run module spider simka to find out what environment modules are available for this application.

System Variables

  • HPC_SIMKA_DIR - installation directory
  • HPC_SIMKA_BIN - executable directory