MAGMA is a tool for gene analysis and generalized gene-set analysis of GWAS data. It can be used to analyse both raw genotype data as well as summary SNP p-values from a previous GWAS or meta-analysis.
module spider magma-gwas to find out what environment modules are available for this application.
- HPC_MAGMA-GWAS_DIR - installation directory
- HPC_MAGMA-GWAS_BIN - executable directory