MAGMA-GWAS
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Description
MAGMA is a tool for gene analysis and generalized gene-set analysis of GWAS data. It can be used to analyse both raw genotype data as well as summary SNP p-values from a previous GWAS or meta-analysis.
Environment Modules
Run module spider magma-gwas to find out what environment modules are available for this application.
System Variables
- HPC_MAGMA-GWAS_DIR - installation directory
- HPC_MAGMA-GWAS_BIN - executable directory