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Badread
[[Category:Software]][[Category:Phylogenetics]] ...RR. Badread: simulation of error-prone long reads. Journal of Open Source Software. 2019;4(36):1316. doi:10.21105/joss.01316.]

3 KB (363 words) - 20:47, 24 September 2020
Mashtree
[[Category:Software]][[Category:genomics‏‎]][[Category:Biology]] ...a rapid comparison of whole genome sequence files. Journal of Open Source Software, 4(44), 1762]

2 KB (280 words) - 13:30, 15 August 2022
PEAR
[[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Genomics]] |{{#vardefine:url|http://www.exelixis-lab.org/web/software/pear}}

3 KB (312 words) - 17:25, 21 August 2022
Nanolyse
[[Category:Software]]

2 KB (260 words) - 19:24, 7 September 2022
EggNOG-mapper
[[Category:Software]][[Category:Phylogenetics]]

3 KB (364 words) - 19:29, 6 December 2021
Mosaic
[[Category:Software]][[Category:Phylogenetics]]

2 KB (282 words) - 14:15, 14 October 2021
Magus
[[Category:Software]][[Category:Sequencing]][[Category:Alignment]]

3 KB (327 words) - 17:51, 16 March 2022
Create SSH Keys Using Putty
==Prerequisite software== Here is a list of the software you will need to be installed on your local machine to start using key-base

7 KB (1,195 words) - 13:39, 26 June 2023
BALi-Phy
[[Category:Software]][[Category:Phylogenetics]] '''BAli-phy''' is MCMC software developed by Ben Redelings with Marc Suchard for simultaneous Bayesian esti

3 KB (402 words) - 17:19, 14 December 2022
IsONclust
[[Category:Software]][[Category:Phylogenetics]]

3 KB (307 words) - 13:24, 19 October 2020
GATK
[[Category:Software]][[Category:Biology]][[Category:NGS]] |{{#vardefine:exe|1}} 

4 KB (540 words) - 16:53, 15 August 2022
QAPA
[[Category:Software]][[Category:Phylogenetics]]

3 KB (305 words) - 16:54, 15 January 2021
PolyPHen
[[Category:Software]][[Category:Biology]][[Category:Genomics]] PolyPhen-2 (Polymorphism Phenotyping v2) is a software tool which predicts possible impact of amino acid substitutions on the stru

3 KB (295 words) - 18:45, 27 May 2022
RELION
[[Category:Software]][[Category:Biology]][[Category:Imaging]]

3 KB (355 words) - 03:29, 16 May 2024
Micop
[[Category:Software]][[Category:Genomics]]

2 KB (269 words) - 16:40, 27 September 2022
Polyply
[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]

2 KB (286 words) - 20:48, 18 April 2022
CIMS
[[Category:Software]][[Category:Biology]][[Category:Genomics]]

3 KB (315 words) - 17:21, 10 June 2022
MITObim
[[Category:Software]][[Category:Phylogenetics]]

3 KB (301 words) - 15:20, 22 April 2020
Basic Linux Use
...indows. The major difference is that on Windows you get the system and the software to do what you want by learning to juggle the activities of clicking left,

6 KB (1,054 words) - 14:45, 9 November 2022
AI Reference Datasets
You may need to use the full path /blue/data/ai for software applications to find the file.

2 KB (262 words) - 19:05, 31 May 2024

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