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Remove reads mapping to the lambda phage genome from a fastq file. This script uses Heng Li's minimap2 and his mappy Python binding.
module spider nanolyse to find out what environment modules are available for this application.
- HPC_NANOLYSE_DIR - installation directory
If you publish research that uses nanolyse you have to cite it as follows:
Bioinformatics, Volume 34, Issue 15, 01 August 2018, Pages 2666–2669, https://doi.org/10.1093/bioinformatics/bty149