Search results

• Tapir
  Pond SLK, Frost SDW, Muse SV: HyPhy: hypothesis testing using phylogenies. Bioinformatics 2005, 21:676-679.
  2 KB (275 words) - 16:40, 10 June 2022
• Nubeamdedup
  nubeam-dedup is a fast and easy-to-use bioinformatics tool removing exact PCR duplicates for sequencing reads, single-end or pair [https://academic.oup.com/bioinformatics/article-abstract/36/10/3254/5753947?redirectedFrom=fulltext Hang Dai and Yo
  2 KB (282 words) - 17:23, 19 August 2022
• Circompara2
  ...e and robust circRNA detection from RNA-seq with CirComPara2, Briefings in Bioinformatics, 2021;, bbab418, https://doi.org/10.1093/bib/bbab418
  2 KB (283 words) - 21:36, 1 April 2022
• Rvtests
  ...prehensive Tool for Rare Variant Association Analysis Using Sequence Data. Bioinformatics 2016 32: 1423-1426.]
  3 KB (293 words) - 21:59, 21 August 2022
• Intervene
  ...ntersection and visualization of multiple gene or genomic region sets. BMC Bioinformatics. 2017;18:287. doi: 10.1186/s12859-017-1708-7]
  3 KB (295 words) - 21:21, 6 December 2019
• GramCluster
  BMC Bioinformatics 2010, 11:601
  2 KB (280 words) - 16:57, 10 June 2022
• SiLiX
  ...ntral.com/articles/10.1186/1471-2105-12-116 Miele V, Penel S, Duret L. BMC Bioinformatics. 2011 Apr 22;12:116. doi: 10.1186/1471-2105-12-116.]
  3 KB (287 words) - 21:24, 6 December 2019
• Kma
  ...precise alignment of raw reads against redundant databases with KMA", BMC Bioinformatics, 2018;19:307.
  2 KB (292 words) - 15:51, 30 January 2023
• Pseudofinder
  Pseudofinder is a bioinformatics tool that detects pseudogene candidates from annotated genbank files of bac
  3 KB (304 words) - 13:41, 11 October 2021
• Mccortex
  ...nformation into de Bruijn graphs Turner I, Garimella K, Iqbal Z, McVean G (Bioinformatics) (Advanced access 15 March 2018)]
  3 KB (297 words) - 22:22, 8 September 2020
• Nextstrain
  ...388 Hadfield et al., Nextstrain: real-time tracking of pathogen evolution, Bioinformatics (2018)]
  3 KB (295 words) - 14:56, 2 March 2020
• PHYUTILITY
  ...tility: a phyloinformatics tool for trees, alignments, and molecular data. Bioinformatics. 24: 715-716
  2 KB (296 words) - 20:22, 12 August 2022
• BRANCH
  |{{#vardefine:url|http://manuals.bioinformatics.ucr.edu/home/branch}} ...matics: [http://bioinformatics.oxfordjournals.org/content/early/2013/03/14/bioinformatics.btt127.abstract epub].
  3 KB (309 words) - 13:09, 15 August 2022
• Mugsy
  ...zberg SL. Mugsy: Fast multiple alignment of closely related whole genomes. Bioinformatics 2011 27(3):334-4]
  3 KB (298 words) - 21:22, 6 December 2019
• IAssembler
  ...kage for de novo assembly of Roche-454/Sanger transcriptome sequences. BMC Bioinformatics 12:453]
  3 KB (301 words) - 18:39, 15 August 2022
• VIRULIGN
  ...notation of viral genomes, Bioinformatics, bty851, https://doi.org/10.1093/bioinformatics/bty851]
  3 KB (304 words) - 19:53, 20 April 2020
• DeconSeq
  ...and Edwards R: Quality control and preprocessing of metagenomic datasets. Bioinformatics 2011, 27:863-864.]
  3 KB (299 words) - 17:00, 10 June 2022
• Synima
  ...biomedcentral.com/articles/10.1186/s12859-017-1939-7 Farrer RA (2017), BMC Bioinformatics 18:507]
  3 KB (313 words) - 20:34, 27 May 2022
• Recycler
  journal={Bioinformatics},
  3 KB (297 words) - 14:21, 11 October 2022
• Svim-asm
  ...free to read and cite our paper in Bioinformatics: https://doi.org/10.1093/bioinformatics/btaa1034
  3 KB (306 words) - 17:16, 31 May 2022

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