DeconSeq
Jump to navigation
Jump to search
Description
The DeconSeq tool can be used to automatically detect and efficiently remove sequence contaminations from genomic and metagenomic datasets. It is easily configurable and provides a user-friendly interface.
Required Modules
Serial
- deconseq
System Variables
- HPC_DECONSEQ_DIR - installation directory
Additional Information
This module also includes PrinSeq.
Citation
If you publish research that uses deconseq you have to cite it as follows: