Search results

• Wgd
  ...command line tools for the analysis of ancient whole genome duplications. Bioinformatics., bty915]
  2 KB (270 words) - 19:52, 27 May 2022
• Kalign
  Bioinformatics (2019) https://doi.org/10.1093/bioinformatics/btz795
  2 KB (265 words) - 19:28, 12 August 2022
• PRINSEQ
  A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is writ
  2 KB (271 words) - 15:52, 10 June 2022
• Plotsr
  ...n multiple genomes, Bioinformatics, 2022; btac196, https://doi.org/10.1093/bioinformatics/btac196
  2 KB (271 words) - 20:00, 5 August 2022
• Graph annotation
  ...s/article/35/3/407/5055406 Dynamic compression schemes for graph coloring, Bioinformatics, 2018 by Harun Mustafa, Ingo Schilken, Mikhail Karasikov, Carsten Eickhoff,
  2 KB (276 words) - 21:20, 6 December 2019
• Faqcs
  |{{#vardefine:url|https://github.com/LANL-Bioinformatics/FaQCs}} ...Sequencing Data with FaQCs. [https://pubmed.ncbi.nlm.nih.gov/25408143/ BMC Bioinformatics. 2014 Nov 19;15]
  2 KB (268 words) - 17:48, 18 May 2023
• Vt
  ...R. Abecasis and Hyun Min Kang. Unified Representation of Genetic Variants. Bioinformatics (2015) 31(13): 2202-2204]
  2 KB (273 words) - 16:13, 10 June 2022
• Phylonet
  ...ge for analyzing and reconstructing reticulate evolutionary histories, BMC Bioinformatics 9:322.
  2 KB (263 words) - 21:23, 6 December 2019
• Deepsig
  ...o R. DeepSig: deep learning improves signal peptide detection in proteins, Bioinformatics (2018) 34(10): 1690-1696.
  2 KB (266 words) - 04:24, 6 December 2022
• NxTrim
  ...l, Jared, et al. "NxTrim: optimized trimming of Illumina mate pair reads." Bioinformatics 31.12 (2015): 2035-2037.]
  2 KB (273 words) - 20:08, 12 August 2022
• Harvesttools
  ...ngr, HarvestTools can also be used for generic conversion between standard bioinformatics file formats.
  2 KB (285 words) - 17:38, 13 October 2022
• Miniwdl
  [[Category:Software]][[Category:Bioinformatics]]
  2 KB (283 words) - 18:55, 1 December 2023
• Phanotate
  ...e 35, Issue 22, 15 November 2019, Pages 4537–4542, https://doi.org/10.1093/bioinformatics/btz265
  2 KB (273 words) - 20:02, 8 November 2022
• Tiara
  ...Tiara: deep learning-based classification system for eukaryotic sequences, Bioinformatics, Volume 38, Issue 2, 15 January 2022, Pages 344–350]
  2 KB (272 words) - 16:36, 22 August 2022
• SEQPower
  |{{#vardefine:url|http://www.bioinformatics.org/spower}} ...nalysis and sample size estimation for sequence-based association studies. Bioinformatics. (2014)]
  2 KB (274 words) - 22:38, 21 August 2022
• GraphViz
  ...abstract graphs and networks. It has important applications in networking, bioinformatics, software engineering, database and web design, machine learning, and in v
  2 KB (276 words) - 19:03, 12 August 2022
• C-wap
  C-WAP is a bash-based bioinformatics pipeline for the analysis of either long-read (ONT or PacBio) or short-read
  2 KB (281 words) - 13:16, 15 August 2022
• Kmerdb
  ...t, M., Danek, A. (2019) Kmer-db: instant evolutionary distance estimation, Bioinformatics, 35(1): 133–136]
  2 KB (277 words) - 13:30, 15 August 2022
• SICER
  ...ng, Dustin E. Schones, Chen Zeng, Kairong Cui, Keji Zhao, and Weiqun Peng, Bioinformatics 25, 1952 - 1958 (2009)]
  2 KB (279 words) - 16:35, 10 June 2022
• Sate
  ...T. Holder. 2010. "DendroPy: A Python library for phylogenetic computing". Bioinformatics 26: 1569-1571. (for all SATé versions from this website) ...of the 15th ISCB Conference on Intelligent Systems for Molecular Biology, Bioinformatics'' '''23''', i559-i568, 2007. And see http://opal.cs.arizona.edu/
  7 KB (910 words) - 20:43, 21 December 2022

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