Graph annotation

Description

graph_annotation website  

Hash-based colored de Bruijn graph with wavelet trie and Bloom filter color compression

Environment Modules

Run module spider graph_annotation to find out what environment modules are available for this application.

System Variables

• HPC_GRAPH_ANNOTATION_DIR - installation directory
• HPC_GRAPH_ANNOTATION_BIN - executable directory

Citation

If you publish research that uses graph_annotation you have to cite it as follows:

Dynamic compression schemes for graph coloring, Bioinformatics, 2018 by Harun Mustafa, Ingo Schilken, Mikhail Karasikov, Carsten Eickhoff, Gunnar Rätsch, and André Kahles.