Difference between revisions of "TraCeR"
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Revision as of 13:17, 31 May 2016
Description
This tool reconstructs the sequences of rearranged and expressed T cell receptor genes from single-cell RNA-seq data. It then uses the TCR sequences to identify cells that have the same receptor sequences and so derive from the same original clonally-expanded cell.
Required Modules
Serial
- tracer
System Variables
- HPC_{{#uppercase:tracer}}_DIR - installation directory