Difference between revisions of "OrthoFinder"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|orthofinder}} |{{#vardefine:url|http://www.stevekellyl...") |
(No difference)
|
Revision as of 14:21, 16 April 2015
Description
OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.
Required Modules
Serial
- orthofinder
System Variables
- HPC_{{#uppercase:orthofinder}}_DIR - installation directory