Nanolyse
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Description
Remove reads mapping to the lambda phage genome from a fastq file. This script uses Heng Li's minimap2 and his mappy Python binding.
Environment Modules
Run module spider nanolyse to find out what environment modules are available for this application.
System Variables
- HPC_NANOLYSE_DIR - installation directory
Citation
If you publish research that uses nanolyse you have to cite it as follows:
Bioinformatics, Volume 34, Issue 15, 01 August 2018, Pages 2666–2669, https://doi.org/10.1093/bioinformatics/bty149