Difference between revisions of "Mosdepth"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mosdepth}} |{{#vardefine:url|https://github.com/brentp/m...")
(No difference)

Revision as of 17:12, 10 July 2018

Description

mosdepth website  

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Environment Modules

Run module spider mosdepth to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:mosdepth}}_DIR - installation directory
  • HPC_{{#uppercase:mosdepth}}_BIN - executable directory




Citation

If you publish research that uses mosdepth you have to cite it as follows:

https://academic.oup.com/bioinformatics/article/doi/10.1093/bioinformatics/btx699/4583630?guestAccessKey=35b55064-4566-4ab3-a769-32916fa1c6e6


Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Mosdepth&oldid=17777"