Mosdepth

Description

mosdepth website  

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Environment Modules

Run module spider mosdepth to find out what environment modules are available for this application.

System Variables

• HPC_MOSDEPTH_DIR - installation directory
• HPC_MOSDEPTH_BIN - executable directory

Citation

If you publish research that uses mosdepth you have to cite it as follows:

https://academic.oup.com/bioinformatics/article/doi/10.1093/bioinformatics/btx699/4583630?guestAccessKey=35b55064-4566-4ab3-a769-32916fa1c6e6