FAR
Revision as of 18:13, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "<!--Compiler and MPI settings - OPTIONAL --> |{" to "|{")
Description
FAR is a software that removes adapter sequences from your sequencing reads by overlap alignment using the Needleman Wunsch algorithm (default) or a quality-based variant of the Needleman Wunsch algorithm. The Needleman Wunsch algorithm is a global exact string-matching algorithm, which offers maximal sensitivity and outperforms heuristic algorithm such as BLAST. Therefore the alignment of an adapter sequence to a read is very accurate.
Required Modules
Serial
- far
- LD_LIBRARY_PATH - run time library path