SHAPEIT

Description

shapeit website  

SHAPEIT is a fast and accurate method for estimation of haplotypes (aka phasing) from genotype or sequencing data.

Environment Modules

Run module spider shapeit to find out what environment modules are available for this application.

System Variables

• HPC_SHAPEIT_DIR - installation directory

Citation

If you publish research that uses shapeit you have to cite it as follows:

https://mathgen.stats.ox.ac.uk/genetics_software/shapeit/shapeit.html#citations