Fit-sne
Revision as of 20:36, 23 May 2022 by Israel.herrera (talk | contribs) (Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Fit-sne}} |{{#vardefine:url|https://github.com/KlugerLab/FIt-SNE}} <!--CONFI...")
Description
t-Stochastic Neighborhood Embedding (t-SNE) is a highly successful method for dimensionality reduction and visualization of high dimensional datasets. A popular implementation of t-SNE uses the Barnes-Hut algorithm to approximate the gradient at each iteration of gradient descent. We accelerated this implementation as follows
Environment Modules
Run module spider Fit-sne
to find out what environment modules are available for this application.
System Variables
- HPC_FIT-SNE_DIR - installation directory