RMATS-turbo
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Description
rMATS turbo is the C/Cython version of rMATS (refer to http://rnaseq-mats.sourceforge.net). The major difference between rMATS turbo and rMATS is speed and space usage. rMATS turbo is 100 times faster and the output file is 1000 times smaller than rMATS. These advantages make analysis and storage of a large scale dataset easy and convenient.
Environment Modules
Run module spider rMATS-turbo to find out what environment modules are available for this application.
System Variables
- HPC_RMATSTURBO_DIR - installation directory
- HPC_RMATSTURBO_BIN - executable directory
Job Script Examples
See the RMATS-turbo_Job_Scripts page for rMATS-turbo Job script examples.