SODA

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Description

soda website  

   SODA is a tool for species delimitation using only gene tree topologies. It's
   a fast way of doing species delimitation and relies on a polytomy test
   developed by Sayyari et. al implemented inside ASTRAL package. SODA has been
   in our tests slightly less accurate than BPP but it is far faster.

Environment Modules

Run module spider soda to find out what environment modules are available for this application.

System Variables

  • HPC_SODA_DIR - installation directory
  • HPC_SODA_BIN - executable directory





Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=SODA&oldid=21058"