TEToolkit
Revision as of 21:29, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
TEtranscripts takes RNA-seq (and similar data) and annotates reads to both genes & transposable elements. It then performs differential analysis using DESeq.
Required Modules
Serial
- gcc/5.2.0
- tetoolkit
System Variables
- HPC_TETOOLKIT_DIR - installation directory
- HPC_TETOOLKIT_BIN - executable directory