Mosdepth

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Description

mosdepth website  

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Environment Modules

Run module spider mosdepth to find out what environment modules are available for this application.

System Variables

  • HPC_MOSDEPTH_DIR - installation directory
  • HPC_MOSDEPTH_BIN - executable directory




Citation

If you publish research that uses mosdepth you have to cite it as follows:

https://academic.oup.com/bioinformatics/article/doi/10.1093/bioinformatics/btx699/4583630?guestAccessKey=35b55064-4566-4ab3-a769-32916fa1c6e6


Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Mosdepth&oldid=19455"