OrthoFinder
Revision as of 21:22, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
OrthoFinder is a program for identifying orthologous protein sequence families. It is written in python and runs as a single command that takes as input a directory of FASTA files, one per species. It outputs a file containing the orthologous groups of genes from these species.
Required Modules
Serial
- orthofinder
System Variables
- HPC_ORTHOFINDER_DIR - installation directory
Validation
- Validated 4/5/2018