Graph annotation

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Description

graph_annotation website  

Hash-based colored de Bruijn graph with wavelet trie and Bloom filter color compression

Environment Modules

Run module spider graph_annotation to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:graph_annotation}}_DIR - installation directory
  • HPC_{{#uppercase:graph_annotation}}_BIN - executable directory




Citation

If you publish research that uses graph_annotation you have to cite it as follows:

Dynamic compression schemes for graph coloring, Bioinformatics, 2018 by Harun Mustafa, Ingo Schilken, Mikhail Karasikov, Carsten Eickhoff, Gunnar Rätsch, and André Kahles.


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