3d-dna
Revision as of 15:24, 7 November 2017 by Maxprok (talk | contribs) (Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|3d-dna}} |{{#vardefine:url|https://github.com/theaidenla...")
Description
This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reported in: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017.
Required Modules
Serial
- 3d-dna
System Variables
- HPC_{{#uppercase:3d-dna}}_DIR - installation directory
- HPC_{{#uppercase:3d-dna}}_BIN - executable directory