3d-dna

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Description

3d-dna website  

This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reported in: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017.

Required Modules

Serial

  • 3d-dna

System Variables

  • HPC_3D-DNA_DIR - installation directory
  • HPC_3D-DNA_BIN - executable directory