Simka
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Description
Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.
Environment Modules
Run module spider simka to find out what environment modules are available for this application.
System Variables
- HPC_SIMKA_DIR - installation directory
- HPC_SIMKA_BIN - executable directory
Citation
If you publish research that uses simka you have to cite it as follows:
WRITE_CITATION_HERE