BloomTree
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Description
The Sequence Bloom Tree (SBT) is a method that will allow you to index a set of short-read sequencing experiments and then query them quickly for a given sequence. The code base provided here is an implementation of SBT written in C++ and is open source.
Required Modules
Serial
- Bloomtree
System Variables
- HPC_{{#uppercase:Bloomtree}}_DIR - installation directory
Citation
If you publish research that uses Bloomtree you have to cite it as follows: