DynamicDBG
Revision as of 21:20, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
Compact data structures for the representation of de Bruijn graphs are important for genome sequence assembly. A fully dynamic data structure supporting efficient and exact membership queries for de Bruijn graphs was recently proposed in [1]. This software is an implementation of the data structure in [1] with dynamic edges (and not dynamic nodes).
Environment Modules
Run module spider dynamicdbg to find out what environment modules are available for this application.
System Variables
- HPC_DYNAMICDBG_DIR - installation directory
- HPC_DYNAMICDBG_BIN - executable directory