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Compact data structures for the representation of de Bruijn graphs are important for genome sequence assembly. A fully dynamic data structure supporting efficient and exact membership queries for de Bruijn graphs was recently proposed in [1]. This software is an implementation of the data structure in [1] with dynamic edges (and not dynamic nodes).

Environment Modules

Run module spider dynamicdbg to find out what environment modules are available for this application.

System Variables

  • HPC_DYNAMICDBG_DIR - installation directory
  • HPC_DYNAMICDBG_BIN - executable directory