Circlator

Description

circlator website  

A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript.

Required Modules

Serial

• gcc/5.2.0
• circlator

System Variables

• HPC_CIRCLATOR_DIR - installation directory

Citation

If you publish research that uses circlator you have to cite it as follows:

"Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology 2015 Dec 29;16(1):294. doi: 10.1186/s13059-015-0849-0. PMID: 26714481.