Circlator

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Description

circlator website  

A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript.

Required Modules

Serial

  • gcc/5.2.0
  • circlator

System Variables

  • HPC_CIRCLATOR_DIR - installation directory




Citation

If you publish research that uses circlator you have to cite it as follows:

"Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology 2015 Dec 29;16(1):294. doi: 10.1186/s13059-015-0849-0. PMID: 26714481.